Gene Bcenmc03_2787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2787 
Symbol 
ID6124449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp3105946 
End bp3106476 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content67% 
IMG OID641639379 
Producturacil-DNA glycosylase superfamily protein 
Protein accessionYP_001766068 
Protein GI170734121 
COG category[L] Replication, recombination and repair 
COG ID[COG3663] G:T/U mismatch-specific DNA glycosylase 
TIGRFAM ID[TIGR00584] mismatch-specific thymine-DNA glycosylate (mug) 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.63165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACG CACTCCCCGA CCTCATCGCG CCCCATCTCG ACGTCCTGTT CTGCGGGATC 
AATCCCGGCC TGATCGCGGC CGCGACCGGT CATCACTTCG CGGGGAGAAA CAACCGCTTC
TGGCGGGTGA TCCATCTCGC GGGCTTCACG CCGACGGAAA TTTCGCCGCA GGATGATCGC
GAGATCCTCC GTTACGGCTG CGGGCTGACG GCCGTGGTGC CGCGGCCGAC CGCCAGTGCC
GATCAGCTGT CGCGCGCGGA ATTCGTGGCC GCGGCCGCCG GGTTCGAGCA GAAGGTCGCG
CATCATGCGC CGCGCTTCGT CGCGTTTCTC GGCAAGGCGG CGTATGCGGC GCTGTCGGGG
CAACGGGAAG TCGCGTGGGG AGTGCAGCCG TCCCCTATCC AGCGGGCGCG GGTGTGGGTG
CTCCCCAACC CCAGCGGCAG AAACCTTGCG TTCGGGCTCG ACGATCTGGT CGATGCGTAT
CATGAGCTTC ATCTCGCGGC GATGAAGGAC CAGCACGATG CGACGCAGTA A
 
Protein sequence
MADALPDLIA PHLDVLFCGI NPGLIAAATG HHFAGRNNRF WRVIHLAGFT PTEISPQDDR 
EILRYGCGLT AVVPRPTASA DQLSRAEFVA AAAGFEQKVA HHAPRFVAFL GKAAYAALSG
QREVAWGVQP SPIQRARVWV LPNPSGRNLA FGLDDLVDAY HELHLAAMKD QHDATQ