| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2746 |
|---|
| Symbol | |
|---|
| ID | 6124409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 3060733 |
|---|
| End bp | 3061932 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641639339 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001766028 |
|---|
| Protein GI | 170734081 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0055718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAC AACTGCAAGA CGCATACATC GTCGCCGCCA GCCGCACGCC GATCGGCAAG
GCCCCGCGCG GTGTCTTCAA GAACACGCGC CCCGACGAGC TGCTGGTTCA CGCGATCAAG
TCGGCCGTCG CGCAGGTGCC CGGTCTCGAC ACGAAGGTGA TCGAGGACGC GATCATCGGC
TGTGCGATTC CGGAAGCCGA GCAGGGCCTG AACGTCGCGC GTATGGGTGC GCTGCTCGCC
GGCCTGCCGC AGACGGTCGG CGGCGTGACG GTCAACCGCT TCTGCGCGTC GGGCATCACC
GCGCTCGCGA TGGCGGCCGA CCGCATCCGT GTGGGCGAAT CGGACGCCAT CTTCGCGGGC
GGCTGCGAAT CGATGAGCAT GGTGCCGATG ATGGGCAACA AGCCGTCGAT GTCGCCGCAC
ATCTTCGATC GCAGCGAAGA CTTCGGCATC GCGTACGGGA TGGGCCTGAC GGCCGAGCGC
GTGGCCGAGC AGTGGAAGGT GAGCCGCGAC GACCAGGACG CGTTCTCGGT CGAGTCGCAC
CGCAAGGCGC TCGCCGCGCA GCAGGCCGGC GAGTTCGGCG ACGAAATCGC TGCGTACACG
ATCACCGAGC GGTTCCCGAA CCTCGCGACC GGTGAGGTCG ACGTGAAGAC GCGCGAGATC
AAGCTCGACG AAGGTCCGCG CGCGGATACG TCGCTCGAAG GCCTCGCGAA GCTGCGCACG
GTATTCGCGA ACAAGGGCTC GGTCACGGCC GGCAACAGCT CGCAGACGTC GGACGGCGCG
GGTGCGCTGC TCGTCGTGTC GGAGAAGGTG CTCAAGGAAT TCAACCTGAC GCCGCTCGCG
CGTTTCGTGA GCTTCGCGGT GCGCGGCGTG CCGCCGGAAA TCATGGGCAT CGGCCCGAAG
GAAGCGATTC CGGCCGCGCT GAAGGCCGCG GGCCTGAAGC AGGACGATCT CGACTGGATC
GAGCTGAACG AGGCGTTCGC CGCGCAGTCG CTGGCGGTGA TGCGCGACCT CGGCCTCGAT
CCGTCGAAGG TCAACCCGAT GGGCGGCGCG ATCGCACTGG GCCACCCGCT CGGCGCGACC
GGCGCGATCC GCGCGGCGAC CGTCGTGCAC GGCCTGCGCC GCCGCAACCT GAAGTACGGG
ATGGTCACGA TGTGCGTCGG CACCGGCATG GGTGCGGCGG GCATCATCGA ACGCCTGTAA
|
|---|
| Protein sequence | MSKQLQDAYI VAASRTPIGK APRGVFKNTR PDELLVHAIK SAVAQVPGLD TKVIEDAIIG
CAIPEAEQGL NVARMGALLA GLPQTVGGVT VNRFCASGIT ALAMAADRIR VGESDAIFAG
GCESMSMVPM MGNKPSMSPH IFDRSEDFGI AYGMGLTAER VAEQWKVSRD DQDAFSVESH
RKALAAQQAG EFGDEIAAYT ITERFPNLAT GEVDVKTREI KLDEGPRADT SLEGLAKLRT
VFANKGSVTA GNSSQTSDGA GALLVVSEKV LKEFNLTPLA RFVSFAVRGV PPEIMGIGPK
EAIPAALKAA GLKQDDLDWI ELNEAFAAQS LAVMRDLGLD PSKVNPMGGA IALGHPLGAT
GAIRAATVVH GLRRRNLKYG MVTMCVGTGM GAAGIIERL
|
|---|
| |