| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2727 |
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| Symbol | |
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| ID | 6124390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 3038766 |
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| End bp | 3040487 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641639320 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001766009 |
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| Protein GI | 170734062 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTAT TGCGGCGCGC CACGCGTGCC GCGTCACCGC TTGCCGACGC CGACTGCATG
GACGACCCGA ACGACATTCT GATTCCGCTG CTTCCGCCGT TTCTCGCGCT GCTCGGACAG
GCCGCCGACG CGCAGGCGCG CGGCGAGCGC GCCGCGCACG ATCTGTGGCT GGCCGCTGCG
GCCCATCTGC ATGCGGTCGA TGCCGATGCG CTGGTGCGGC TCACGACGAC GCTCGTCGCG
CGGCAGCGCA CGGCCGACGC GCTCGCGCTC GCCGAATGCG CGGTGCGCGT GCAGCCGGGC
GCGGCCACGC ACTTCAACCA CGGTTACGCG CTGCAGATGG CCGGCCGTCA CGCGGATGCG
GTCGCGCCGT ACCGCGCGGC GCTCGCGATC GATGCCGGCT GGCCGTCGCT GCGCAACAAC
CTCGCGATCG CGCTGCGCTT GTCGGGCGCG GATCGCGCGG AAGAAATCGC GCTGCTCGAC
GCGGCCGTGA AGCACGATCC GCGGGACGTG CAGGCATGGA TTAACCTCGT CGTCGCGCGG
ATCGCGACGC ACGATCTGGA CGCTGCGCTC GCGTGCGCAG CGCGGCTCGC CGACCTCGCG
CCCGACAACG CGCTCGCGAT GAACAACGTC GCGATGGCGA TGAAGGAGGC GCAGCGCTGG
GACGAGGCCG AGCGCCATGC GGCGCGCGCA TGCGAGCTGG CGCCCGACGA TGCGTCGTTC
CGCTTCAATC TCGCGATCAT CCAGCTCGTG CGCGGCAACC ACGCGGCCGG CTGGCGCGGC
CACGAGGCGC GCTGGGACGG CGCGGGCGAG TTGCGCGGCC GCCGGCCGGC GCTGCCGGGC
CCGCGCTGGC AGGGCGAGCC GCTCTCCGGC AAGACGCTGC TGGTGTGGGG CGAGCAGGGG
CTCGGCGACG TGCTGCAGTT CTGCCGCTTC GTCGTGCCGC TCGCCGAGCG TGTGCATCGC
GAGGGCGGCC GGCTCGCGTG GAATACGTTT CCGGCGCTCG GCACGCTGAT GCAGCGCAGC
CTCGGTGCGC ACGCGGACGT GTTCGGCGCG GGCGGCGGCA TCGATGCGTT GCCGGCATTC
GATTACGAAG TGCCGCTGAT CGGCCTGCCG CTGATGCTCG GCATGGAGGC GTCGACGCTC
GCCGCCTCGG TGCCGTACCT GCGGGCCGAA CGGGGCGCAC GCGACGCGTG GCGCGCGAGG
CTCGCGGGCG ACGGCCGGCT GAAGGTCGGG CTCGTGTGGA CGGGCAGTGC GGGCCATCAG
CGCAATCCGT TCCGGCGCGT CGGGCTCGAG CGCTACTCGG ACGCGTTTCG CGGCATCGAC
GGCGTCACGT TCTATTCGCT GCAGCCGGGT GCGGACGCGG ACGTCGCCGC CGCGCGCGCG
GCCGGTTTCG CGATCGAGGA CTACACGGCC GAATTGACGA GCTTCGACGA TACGGCCGCG
TTCATCGGTG CGCTGGATCT CGTGATCACC GTGTGCACGT CGGTCGCGCA TCTGGCCGGC
GCGCTCGGCG CGCGCACCTG GGTGCTGCTC GACGTGAATC CGCACTGGCC GTGGCTGCTA
GATCGCCGGG ACAGCCCGTG GTATCCGACC GCGACGTTGT ACCGGCAGCC GACGTTCGGC
GCGTGGGCGC CGGTGATGGA GGAAGTGAGC CGCGATCTGC GGCGCTTCGC CGCGCAGCCG
GAGCAACTGG ACCAACTGGC CCAAGCGGAC CGGCAGGCCT GA
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| Protein sequence | MRVLRRATRA ASPLADADCM DDPNDILIPL LPPFLALLGQ AADAQARGER AAHDLWLAAA
AHLHAVDADA LVRLTTTLVA RQRTADALAL AECAVRVQPG AATHFNHGYA LQMAGRHADA
VAPYRAALAI DAGWPSLRNN LAIALRLSGA DRAEEIALLD AAVKHDPRDV QAWINLVVAR
IATHDLDAAL ACAARLADLA PDNALAMNNV AMAMKEAQRW DEAERHAARA CELAPDDASF
RFNLAIIQLV RGNHAAGWRG HEARWDGAGE LRGRRPALPG PRWQGEPLSG KTLLVWGEQG
LGDVLQFCRF VVPLAERVHR EGGRLAWNTF PALGTLMQRS LGAHADVFGA GGGIDALPAF
DYEVPLIGLP LMLGMEASTL AASVPYLRAE RGARDAWRAR LAGDGRLKVG LVWTGSAGHQ
RNPFRRVGLE RYSDAFRGID GVTFYSLQPG ADADVAAARA AGFAIEDYTA ELTSFDDTAA
FIGALDLVIT VCTSVAHLAG ALGARTWVLL DVNPHWPWLL DRRDSPWYPT ATLYRQPTFG
AWAPVMEEVS RDLRRFAAQP EQLDQLAQAD RQA
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