| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2723 |
|---|
| Symbol | |
|---|
| ID | 6124386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 3034111 |
|---|
| End bp | 3034887 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641639316 |
|---|
| Product | unkown domain/putative metalloprotease fusion protein |
|---|
| Protein accession | YP_001766005 |
|---|
| Protein GI | 170734058 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0319] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.597285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCT CCCGTTCCCG CAAGTCCGGC CGCGCCCCGT CCGCCGCGCC CGAATCCCCC
CGCCTTTCGC TGTTCGACGC GAAGGGCAAA GCCCGCACCG TCAACGCACA AGGGCTGCGG
ATCGACTTCC CGGACGGCCG CAGCCTGATG TTCGACCTGT CGGGCAGCTC GGGCGACGCG
GCCGTCGCGA TCGTCGCGCA GCACAACGAT CCGGCGATGC GCGCGAAGCT CGCGCTGCAG
CCCGAGCACT ACGACAGCGT GACGCTGCAC GTCGGCGCCG AGTTCGCGCC GCGCGAGGAC
GACCCCGAAG ACGAGCCGCG CGCGCTGGAG CTCGACCTGT CCGTGCAGTA CGGCGACGAG
ATCACGAGCG ACGTGCGCAA GACGCTGCCG AAGCGCAAGC TGATCGCCGA GTGGATCGAG
CCGGCGCTGT TCGCGAGCGC GCAGCTCACC GTGCGCTTCG TCGGCGAAAA CGAAGGCCGG
ACGCTGAATG CCGGCTACCG CCACAAGGAC TATCCGACCA ACGTGCTGAC CTTCGCGTAC
GACGCGGCGC CCGACGGCAC CGTGATCGGC GACCTCGTGC TGTGCTGCCC GGTGGTCGAG
AAGGAAGCGC ACGACCAGGG CAAGCCGCTC GCGGCCCATT ACGCGCACCT GCTGGTGCAC
GGCGCGCTGC ACGCGCAGGG CTACGATCAC GAGACGAGCG ACGAGGACGC GGCCGAAATG
GAAGCGCTCG AAGTCGACAT CCTCGCGAAA CTGGGTTTCC CGAACCCGTA CCAGTAA
|
|---|
| Protein sequence | MKSSRSRKSG RAPSAAPESP RLSLFDAKGK ARTVNAQGLR IDFPDGRSLM FDLSGSSGDA
AVAIVAQHND PAMRAKLALQ PEHYDSVTLH VGAEFAPRED DPEDEPRALE LDLSVQYGDE
ITSDVRKTLP KRKLIAEWIE PALFASAQLT VRFVGENEGR TLNAGYRHKD YPTNVLTFAY
DAAPDGTVIG DLVLCCPVVE KEAHDQGKPL AAHYAHLLVH GALHAQGYDH ETSDEDAAEM
EALEVDILAK LGFPNPYQ
|
|---|
| |