Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2708 |
Symbol | |
ID | 6124371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 3018265 |
End bp | 3018981 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641639301 |
Product | MIP family channel protein |
Protein accession | YP_001765990 |
Protein GI | 170734043 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.200517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACCTT ATATTGCAGA ATTCATCGGC ACGGCGATCC TCGTGCTGCT CGGCAACGGC GCGGTCGCAA ACGTGCTGCT TGCAAAGACC AAGGGCAAAG GCGCGGATCT AATCGTGATC GTGATGGGCT GGGCGATGGC GGTATTCGTC GCGGTCTACG TGACCGCGTC GTTCAGCGGC GCGCACCTGA ACCCGATCGT CACGATCAGC CTCGCGCTCG CGGGCAAGTT CGCGTGGTCG AAAGTCGGCG GCTACGTGCT CGCGCAGATG CTCGGCGGGA TGGCGGGCGC GCTGCTCGTG TGGCTCGCGT ATCGCCAGCA CTTCGCGAAG GAAGCCGATG CCGACCTGAA GCTCGCGGTG TTCTGCACGG CGCCGGCGAT CCGCAGCACC ACGCACAACG TGCTGACCGA AGCGATCTGC ACGTTCGTGC TGATCCTCGG CGTGCTGTAT CTCGCGTCGC CGCAAGTCGG CCTCGGCGCA CTCGACGCGC TGCCCGTCGG CCTGCTCGTG CTCGGCATCG GCATCTCGCT CGGCGGCCCG ACCGGCTATG CGATGAGCCC CGCGCGCGAC CTGTCGCCGC GCATCATGCA TGCGCTGCTG CCGATTCCCG GCAAGCGCGA CAGCGACTGG CGCTATGCGT GGGTGCCCGT CGTCGGCCCG CTGCTCGGCG GCGCGGCGGC AGCCGGCCTG TATCTGCGCC TGCACGCGAT GGCCTGA
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Protein sequence | MSPYIAEFIG TAILVLLGNG AVANVLLAKT KGKGADLIVI VMGWAMAVFV AVYVTASFSG AHLNPIVTIS LALAGKFAWS KVGGYVLAQM LGGMAGALLV WLAYRQHFAK EADADLKLAV FCTAPAIRST THNVLTEAIC TFVLILGVLY LASPQVGLGA LDALPVGLLV LGIGISLGGP TGYAMSPARD LSPRIMHALL PIPGKRDSDW RYAWVPVVGP LLGGAAAAGL YLRLHAMA
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