| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2706 |
|---|
| Symbol | glpD |
|---|
| ID | 6124369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 3015045 |
|---|
| End bp | 3016568 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641639299 |
|---|
| Product | glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_001765988 |
|---|
| Protein GI | 170734041 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.76503 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCAAC CGAATCGCTA CGATCTGCTC GTCGTCGGCG GCGGCATCAA CGGCGCGGGA
ATCGCGCGCG ATGCGGCCGG CCGCGGCCTG TCGGTCATGC TCTGCGAGCA GGACGACCTC
GCGTCGCACA CGTCGTCGTC CAGCACGAAG CTGATTCACG GCGGCCTGCG TTACCTCGAG
TACAACGAGT TCGGGCTGGT GCGCAAGGCG CTGCAGGAAC GCGAAACGCT GCTGCGCGCG
GCGCCGCACA TCATGTGGCC GCTGCGCTTC GTGATGCCGC ACATGCCGAA CCTGCGCCCG
GCCTGGCTGA TCCGCATCGG CCTGTTCCTC TACGATCACC TCGCGAAACG CGAGCTGCTG
CCCGGCTCGC GCGGCATCGA CATGCGCCGC CATGCGGCCG GCGCGCCGCT GATCGACTCG
ATCAAGCGCG GCTTCGTGTA TTCCGACGGC TGGGTCGACG ACGCGCGCCT CGTCGTGCTG
AACGCGATGG ATGCGAAGGA GCGCGGCGCC GAGATCCTGA CGCGCACGAA GCTCGTTTCC
GCCGAACGCC GCGGCGACGA ATGGGAAGCG CGGCTGCAGC ACCCCGACGG TTCGATCCGC
GTCGTACACG CACGCGCGAT CGCGAACGCG GCCGGCCCGT GGGTCGGCGA GGTGCTGCAC
GGCGCGCTCG GCCGCGGCGC GCATCACAGC GTGCGGCTCG TGAAGGGCAG CCACATCATC
ACGCGCCGCC TGTTCGATCA CGATCACGCG TACATCTTCC AGAATCCGGA CAAGCGGATC
ATATTCGCGA TTCCGTACGA GCACGACTTC ACGCTGATCG GCACGACCGA CGTCGAATAC
ACGAACGATC CCGCGAAGGT CGCGATCGAT CGGGACGAGA CGCAATACCT GTGCGATTCG
ATCAACCGCT ACTTCAAGCG CAAGATCTCG CCGGCCGACG TGCACTGGAC CTATTCGGGC
GTGCGCCCGC TGCTGGAAGA CGAGAACGCG GCGAACGCAT CGGCCGTCAC GCGCGACTAT
CGCCTCGAAC TCGACGATGG CGCGGGCGCC CCGCTGCTGT CGGTGTTCGG CGGCAAGATC
ACGACGTTCC GCAAGCTCGC GGAAGAAGCC GGCGACATGC TGTGCCGCGC GCTCGGTCGC
GACGCGAAGA CCTGGACGGC CGGCGTCGCG CTGCCGGGCG GCGACATCGC GGACGCGAAG
TTCGACGGGT TCGCCAGCGC GTTCGCGAAA CGCCATCCGT GGCTGCCCGC CGCGCTCGCG
CGCCGCTATG CACGTGCGTA CGGCACGCGT GCGGAGCGCG TGGTCGACGG CGCGAAATCG
CTCGCCGATC TCGGCGCCGA AATCGCGCCG GGCATCCACG ACGCCGAACT GCGCTATCTG
CGCGATGCCG AATGGGCGAC CTGCGCGCAG GACGTACTGT GGCGCCGCTC GAAGCTCGGC
CTGCACGTCG CGCCCGGCAC GCTCGATGCG GTGACCGCCG CGGTCGACGC ATGGTTCGCC
GCCGCGCATG CGCCGCACGC GTGA
|
|---|
| Protein sequence | MTQPNRYDLL VVGGGINGAG IARDAAGRGL SVMLCEQDDL ASHTSSSSTK LIHGGLRYLE
YNEFGLVRKA LQERETLLRA APHIMWPLRF VMPHMPNLRP AWLIRIGLFL YDHLAKRELL
PGSRGIDMRR HAAGAPLIDS IKRGFVYSDG WVDDARLVVL NAMDAKERGA EILTRTKLVS
AERRGDEWEA RLQHPDGSIR VVHARAIANA AGPWVGEVLH GALGRGAHHS VRLVKGSHII
TRRLFDHDHA YIFQNPDKRI IFAIPYEHDF TLIGTTDVEY TNDPAKVAID RDETQYLCDS
INRYFKRKIS PADVHWTYSG VRPLLEDENA ANASAVTRDY RLELDDGAGA PLLSVFGGKI
TTFRKLAEEA GDMLCRALGR DAKTWTAGVA LPGGDIADAK FDGFASAFAK RHPWLPAALA
RRYARAYGTR AERVVDGAKS LADLGAEIAP GIHDAELRYL RDAEWATCAQ DVLWRRSKLG
LHVAPGTLDA VTAAVDAWFA AAHAPHA
|
|---|
| |