Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2691 |
Symbol | |
ID | 6124354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2998513 |
End bp | 3001620 |
Gene Length | 3108 bp |
Protein Length | 1035 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641639284 |
Product | glycosyl transferase family protein |
Protein accession | YP_001765973 |
Protein GI | 170734026 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCGGC CGCTGAATCG TATCCTGCCG CGCGTGACCG GTCCCGCCTC GGTGTGGACG TGGGTCAAGT GGTCCTTGCT CGCCGCACTG CTGATCGCGG TCGCGATCGT CGCGCGGCTC GTGCAGACCG AGATCGAAAC CTCCCGGCTG CAGGCGCGCT ACCTGTCCGA GCTTACCCGC GACGTCGGCT ATACGGTCGA GGCGGGGCCG AGCGATCACA TCCGCTTTCC CGCGAACGGC CCGTACGACC AGCGCTTCGG CTATGCGATG ATTCCCGCGT TCCAGCAGCG GCTGCTCGCG CGCGGCTTCG TCGTCAGCGA GCAGGCGCGC GATTCGCAGC GAATGCTGGC GCTCGGCGAG CGCGGGCTGT TCCTTCCTTA TGAAGAGAAG GACCAGACGG GCCTGATGCT GTTCGATTCG ACCGGCTCGC CGCTGTTCGC GACCGTGTTT CCGCAGCGCG TCTACGCGGA CTTCGACACG GTGCCGCGCG TGATCACCGA TTCGCTGCTG TTCATCGAGG ATCGTTACCT GCTCGACGGG AACGAACCGA ACCGCAACCC GGCAATCGAC TGGGGACGCT TCAGCCGCGC GCTCGCCGAC CAGGCGCTGC ACGTCGTCAA CCGCCATCAG GCGCGCCCGG GCGGCAGCAC GCTCGCCACG CAGATCGAGA AATTCCGCCA TTCGCCCGAG GGTCGCACCG CGACGCCGCC CGAAAAGCTG CGGCAGATCG CGTCCGCGTC GGTGCGCGCC TACCTGAACG GTCCGCAGAC GATGCTCGCG CGCCGCACGA TCGTCGTGCG CTACCTGAAC TCGGTGCCGC TCGCCGCGCG GCCGCACGTG GGCGAAATCA CCGGCATCGG CGACGGTCTC GCCGCGTGGT ACGGCCGCGA CTTCAACGAC GTGAACCGCA TCCTCTCCGC GCCGACGACC GGCGACAACG TCGACCAGCA AGGCAAGACG TTCCGCGAGG TGTTGTCGCT GCTGATCGCG CAGCGCGCGC CGTCGTACTT CCTCAACCGC GGCTATCCGG CGTTGCAGAA GCTGACCGAC AGCTACCTGC GGCTGCTATC CAACGGCGGC ATGATCTCGC CCGCGCTGCG CGATGCCGCG CTCGCCGCGC AGATCGAACG CAGCGCGCCG CCGGCCGCCG CGCGCGTGCA GTCGTTCGTG TCGCGCAAGG CCGTCACCTC CGCGCGCGCA TCGCTGCTGT CGGCGCTGGG CATCAGCGAC CTGTACCAGC TCGACCAGCT CGACCTGCAG GCCACCAGCA CGCTCGACAA CGGCGTGCAG CAGGCGGTCG CCGAGCGGCT CGCGCGGGCG TCGACGCGCG ACGGCGCGCA GGCCGCCGGC CTGTACGGTT TCGAGATGCT CGCGCCGAAG GACGACCCGT CGCACCTCAC GTACAGCTTC ACGCTGTACG AGCACCGCAA CGGCGCGAAC ATGCTGCGCG TGCAGACCGA CAGCGTGAAC CAGCCGTTCG ACGTGAATCG CGGCGGCCGC ATCAACCTCG GCTCGACCGC GAAGCTGCGC ACGCTGATCA CGTACCTGCA GATCGTCTCC GACCTCCATG CGCGCTACGC GAACCTGTCG AACGCGGAGC TGGCGCGCGT GAAGCCCGAT CCGATCGACG GGCTGTCGCG CTGGGCGCTC GACTACCTGT CGCATACGCG CGACCGCTCG CTGCGGGCGA TGCTCGATGC GTCCGTCGAG CGCAAGTATT CGGCGAGCCC GGACGTGTTC TACACGGGCG GCGGCGCGCA GGTGTTCTCC AACTTCGAGA AGTCGGACAA CGGCCGCATC CTGACGCTGC ACGCGGCGTT CGAGCACTCG GTCAACCTCG TGTTCGTGCG GCTGATGCGC GACATCGTTC ACTATGAAAC GCTGCAGGCG GCCGGCCCGT CGTCGTCGTG GCTCAACGAT CCCGCGCAGC GCCAGCATTA CCTGCAGCAA TTCGTCGACG GCGAAAGCCA GGTCTACGTG AAGCGCTACT ACACGCGCTA TGCGGGCAAG GCGCCCGACG ACGCGCTCGC GCTGATGCTG CGCGACGTAC GCAAGTCGCC GCCGAAGCTC GCGACGGTGC TGCGCAGCGT CGCGCCGAAC GAGTCGCTCG CGTGGTTCGC CGCGCAGATG CGCGCGCAAC TGAAGGGCAC GCCGGCCGCG ACGCTGTCCG ACGACGATCT CGCCGCGCTC TACGCGAAGT ACGCGATCGA CCGCTTCAAT CTCAACGACC GCGGCTATAT CGCGAGCGTC CATCCGCTCG CACTGTGGAC GCTCAACTAC CTGCGCGCGC ACCCGGGCGC GTCGCTCGCC GAGGTTCAGC GCGACAGCCG CGATACGCGT TTCTACACGT ATTCGTGGCT GTACAAGACC CGCTACCACG CGACGCAGGA CCGGCGCATC CGCCGCATGG TCGAGCTGCG CGCGTACGCG GAGATCACGA AGTCGTGGCG CGCGCTCGGC TACCCGTTCG CGGAAGTGAC GCCGTCCTAT GCGGCCGCGA TCGGTGCATC GGGCGACCAG CCCGACGCGC TCGCGAAACT GATCGGCCTG ATCGCGAACG GTGGCCAGAA GGCGCCGACC GAGACGATCA CGCGGCTCGA TTTCGCGAAG GGCACGCCGT ACGAAACCCG TTTCGTGCGC GCGGCCGCCC AGCCGCAGCC GGTGCTGTCG CCGGAGATCG TCAACGTGGC GCACACGCTG CTGCGCGACG TCGTGCTCCA CGGCACCGCG CGCCGCCTCG CGGGCGGGCT CACGCTGCCG GACGGCAAGA CGCTCGACGT GTACGGCAAG ACGGGGACGG GCGACCAGCG CTTCAACGTT TATGCGCGCG GCGCGCGGCT GATCGAGTCG CGCAAGGTCA ACCGCAGCGG CACCTTCGTG TTCGCGATCG GCGACCGGTT CTTCGGCGTG CTGACGGCGA CCGCGCACGA ACCGTATGCG GCGCGCTACG ACTTCACGAG CGCGATGGCC GTGCAGTTGC TGAAGTCGAT GGCGCCGGCG CTCGCGCCGC TGATCGAACG CCCGGCCGAC GCTGGCACGC GTACCGCGGG GCCGGCGCCG CAGGCGGAAA CGCCTGCGGC GAATGCAGCG GCCGTGCAAC CGTCCTGA
|
Protein sequence | MNRPLNRILP RVTGPASVWT WVKWSLLAAL LIAVAIVARL VQTEIETSRL QARYLSELTR DVGYTVEAGP SDHIRFPANG PYDQRFGYAM IPAFQQRLLA RGFVVSEQAR DSQRMLALGE RGLFLPYEEK DQTGLMLFDS TGSPLFATVF PQRVYADFDT VPRVITDSLL FIEDRYLLDG NEPNRNPAID WGRFSRALAD QALHVVNRHQ ARPGGSTLAT QIEKFRHSPE GRTATPPEKL RQIASASVRA YLNGPQTMLA RRTIVVRYLN SVPLAARPHV GEITGIGDGL AAWYGRDFND VNRILSAPTT GDNVDQQGKT FREVLSLLIA QRAPSYFLNR GYPALQKLTD SYLRLLSNGG MISPALRDAA LAAQIERSAP PAAARVQSFV SRKAVTSARA SLLSALGISD LYQLDQLDLQ ATSTLDNGVQ QAVAERLARA STRDGAQAAG LYGFEMLAPK DDPSHLTYSF TLYEHRNGAN MLRVQTDSVN QPFDVNRGGR INLGSTAKLR TLITYLQIVS DLHARYANLS NAELARVKPD PIDGLSRWAL DYLSHTRDRS LRAMLDASVE RKYSASPDVF YTGGGAQVFS NFEKSDNGRI LTLHAAFEHS VNLVFVRLMR DIVHYETLQA AGPSSSWLND PAQRQHYLQQ FVDGESQVYV KRYYTRYAGK APDDALALML RDVRKSPPKL ATVLRSVAPN ESLAWFAAQM RAQLKGTPAA TLSDDDLAAL YAKYAIDRFN LNDRGYIASV HPLALWTLNY LRAHPGASLA EVQRDSRDTR FYTYSWLYKT RYHATQDRRI RRMVELRAYA EITKSWRALG YPFAEVTPSY AAAIGASGDQ PDALAKLIGL IANGGQKAPT ETITRLDFAK GTPYETRFVR AAAQPQPVLS PEIVNVAHTL LRDVVLHGTA RRLAGGLTLP DGKTLDVYGK TGTGDQRFNV YARGARLIES RKVNRSGTFV FAIGDRFFGV LTATAHEPYA ARYDFTSAMA VQLLKSMAPA LAPLIERPAD AGTRTAGPAP QAETPAANAA AVQPS
|
| |