Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2684 |
Symbol | |
ID | 6124347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2991129 |
End bp | 2992787 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641639276 |
Product | general substrate transporter |
Protein accession | YP_001765966 |
Protein GI | 170734019 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0683854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGT TAGGCGGGCA AATTTCGCAC TCGCCGATGA CGGGCGAAGA AAAGAAGGTG ATCTTCGCGT CGTCGCTCGG CACCGTGTTC GAGTGGTACG ACTTTTACCT GGCCGGCTCG CTCGCGGCCT ACATCAGCAA GAGCTTCTTC TCCGGCGTCA ATCCGACCGC CGCGTTCATC TTCACGCTGC TCGGCTTCGC GGCCGGCTTC GCGGTGCGGC CGTTCGGCGC GATCGTGTTC GGCCGGCTCG GCGACCTCGT CGGCCGCAAG CACACGTTCC TCGTGACGAT CGTGATCATG GGCGTCTCGA CGTTCGTGGT CGGCTTCCTG CCCGGCTACG CGTCGATCGG CATCGCCGCC CCCGTGATCT TCATCGCGAT GCGGCTGTTG CAGGGCCTCG CGCTCGGCGG CGAGTACGGC GGCGCGGCGA CCTACGTCGC CGAGCATGCG CCGGCCAACC GGCGCGGCTT CTACACCGCC TGGATCCAGA CGACGGCCAC GCTCGGGCTG TTCCTGTCGC TGCTCGTGAT CCTCGGCGTG CGCACGTTCA TCGGCGAAGA AGCGTTCGGC AGCTGGGGCT GGCGCGTGCC GTTCGTCGCA TCGATCCTGC TGCTCGGGGT GTCGGTGTGG ATTCGGCTGC AGCTGAACGA ATCGCCGGTG TTCCTGCGCA TCAAGGCGGA AGGCAAGACG TCGAAGGCGC CGCTGACCGA AGCGTTCGGC CAGTGGAAGA ACCTGAAGAT CGTGATCCTC GCGCTGATCG GCCTGACGGC CGGCCAGGCC GTCGTGTGGT ACACGGGCCA GTTCTACGCG CTGTTCTTCC TCACGCAGAC GCTGAAGGTC GACGGCGCCA GCGCGAACAT CCTGATCGCG ATCGCGCTCC TGATCGGCAC GCCGTTCTTC CTGTTCTTCG GCTCACTGTC GGACAAGATC GGCCGCAAGC CGATCATCCT GGCGGGCTGC CTGATCGCCG CGCTGACCTA CTTCCCGCTG TTCAAGGCGC TCACGCACTA CGCGAACCCG CAGCTCGAAC TCGCGACGCA GAAGGCGCCG ATCACGGTCC TCGCCGATCC GGCCACCTGC TCGTTCCAGT TCAACCCGGT GGGCACGTCG AAGTTCACCA GCTCGTGCGA CATCGCGAAG AGCGCGCTCT CGAAGGCCGG CCTGAACTAC GAGAACGTCG CGGCGCCGGC CGGCACGCAG GCCGAAATCA AGGTCGGCGA CACGGTGATC CAGACCTACG ACGGCAAGGC GGCCGACGCG AAGGCGCAGG GCGCGGCGTT CGACAAGACG CTCGCGTCGA CGCTGAAGGG GGCCGGCTAC CCGGCGAAGG CCGACCCGGC GCAACTCAAC TGGCCGATGA CGATCGTGAT CCTGACCATC CTCGTGATCT TCGTGACGAT GGTCTACGGC CCGATCGCCG CGATGCTGGT CGAGATGTTC CCGACGCGGA TCCGCTACAC GTCGATGTCG CTGCCCTATC ACATCGGCAA CGGCTGGTTC GGCGGCTTCC TGCCGGCAAC CGCGTTCGCG ATCGTCGCGG CGAAGGGCAA CATCTACTCG GGGCTCTGGT ATCCGATCGT GATCGCGCTG GCCACGTTCG TGATCGGCCT GCTGTTCGTC AAGGAGACGA AGGACTCGGA CATCTACGCG CAGGATTGA
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Protein sequence | MATLGGQISH SPMTGEEKKV IFASSLGTVF EWYDFYLAGS LAAYISKSFF SGVNPTAAFI FTLLGFAAGF AVRPFGAIVF GRLGDLVGRK HTFLVTIVIM GVSTFVVGFL PGYASIGIAA PVIFIAMRLL QGLALGGEYG GAATYVAEHA PANRRGFYTA WIQTTATLGL FLSLLVILGV RTFIGEEAFG SWGWRVPFVA SILLLGVSVW IRLQLNESPV FLRIKAEGKT SKAPLTEAFG QWKNLKIVIL ALIGLTAGQA VVWYTGQFYA LFFLTQTLKV DGASANILIA IALLIGTPFF LFFGSLSDKI GRKPIILAGC LIAALTYFPL FKALTHYANP QLELATQKAP ITVLADPATC SFQFNPVGTS KFTSSCDIAK SALSKAGLNY ENVAAPAGTQ AEIKVGDTVI QTYDGKAADA KAQGAAFDKT LASTLKGAGY PAKADPAQLN WPMTIVILTI LVIFVTMVYG PIAAMLVEMF PTRIRYTSMS LPYHIGNGWF GGFLPATAFA IVAAKGNIYS GLWYPIVIAL ATFVIGLLFV KETKDSDIYA QD
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