Gene Bcenmc03_2684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2684 
Symbol 
ID6124347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2991129 
End bp2992787 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content66% 
IMG OID641639276 
Productgeneral substrate transporter 
Protein accessionYP_001765966 
Protein GI170734019 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0683854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGT TAGGCGGGCA AATTTCGCAC TCGCCGATGA CGGGCGAAGA AAAGAAGGTG 
ATCTTCGCGT CGTCGCTCGG CACCGTGTTC GAGTGGTACG ACTTTTACCT GGCCGGCTCG
CTCGCGGCCT ACATCAGCAA GAGCTTCTTC TCCGGCGTCA ATCCGACCGC CGCGTTCATC
TTCACGCTGC TCGGCTTCGC GGCCGGCTTC GCGGTGCGGC CGTTCGGCGC GATCGTGTTC
GGCCGGCTCG GCGACCTCGT CGGCCGCAAG CACACGTTCC TCGTGACGAT CGTGATCATG
GGCGTCTCGA CGTTCGTGGT CGGCTTCCTG CCCGGCTACG CGTCGATCGG CATCGCCGCC
CCCGTGATCT TCATCGCGAT GCGGCTGTTG CAGGGCCTCG CGCTCGGCGG CGAGTACGGC
GGCGCGGCGA CCTACGTCGC CGAGCATGCG CCGGCCAACC GGCGCGGCTT CTACACCGCC
TGGATCCAGA CGACGGCCAC GCTCGGGCTG TTCCTGTCGC TGCTCGTGAT CCTCGGCGTG
CGCACGTTCA TCGGCGAAGA AGCGTTCGGC AGCTGGGGCT GGCGCGTGCC GTTCGTCGCA
TCGATCCTGC TGCTCGGGGT GTCGGTGTGG ATTCGGCTGC AGCTGAACGA ATCGCCGGTG
TTCCTGCGCA TCAAGGCGGA AGGCAAGACG TCGAAGGCGC CGCTGACCGA AGCGTTCGGC
CAGTGGAAGA ACCTGAAGAT CGTGATCCTC GCGCTGATCG GCCTGACGGC CGGCCAGGCC
GTCGTGTGGT ACACGGGCCA GTTCTACGCG CTGTTCTTCC TCACGCAGAC GCTGAAGGTC
GACGGCGCCA GCGCGAACAT CCTGATCGCG ATCGCGCTCC TGATCGGCAC GCCGTTCTTC
CTGTTCTTCG GCTCACTGTC GGACAAGATC GGCCGCAAGC CGATCATCCT GGCGGGCTGC
CTGATCGCCG CGCTGACCTA CTTCCCGCTG TTCAAGGCGC TCACGCACTA CGCGAACCCG
CAGCTCGAAC TCGCGACGCA GAAGGCGCCG ATCACGGTCC TCGCCGATCC GGCCACCTGC
TCGTTCCAGT TCAACCCGGT GGGCACGTCG AAGTTCACCA GCTCGTGCGA CATCGCGAAG
AGCGCGCTCT CGAAGGCCGG CCTGAACTAC GAGAACGTCG CGGCGCCGGC CGGCACGCAG
GCCGAAATCA AGGTCGGCGA CACGGTGATC CAGACCTACG ACGGCAAGGC GGCCGACGCG
AAGGCGCAGG GCGCGGCGTT CGACAAGACG CTCGCGTCGA CGCTGAAGGG GGCCGGCTAC
CCGGCGAAGG CCGACCCGGC GCAACTCAAC TGGCCGATGA CGATCGTGAT CCTGACCATC
CTCGTGATCT TCGTGACGAT GGTCTACGGC CCGATCGCCG CGATGCTGGT CGAGATGTTC
CCGACGCGGA TCCGCTACAC GTCGATGTCG CTGCCCTATC ACATCGGCAA CGGCTGGTTC
GGCGGCTTCC TGCCGGCAAC CGCGTTCGCG ATCGTCGCGG CGAAGGGCAA CATCTACTCG
GGGCTCTGGT ATCCGATCGT GATCGCGCTG GCCACGTTCG TGATCGGCCT GCTGTTCGTC
AAGGAGACGA AGGACTCGGA CATCTACGCG CAGGATTGA
 
Protein sequence
MATLGGQISH SPMTGEEKKV IFASSLGTVF EWYDFYLAGS LAAYISKSFF SGVNPTAAFI 
FTLLGFAAGF AVRPFGAIVF GRLGDLVGRK HTFLVTIVIM GVSTFVVGFL PGYASIGIAA
PVIFIAMRLL QGLALGGEYG GAATYVAEHA PANRRGFYTA WIQTTATLGL FLSLLVILGV
RTFIGEEAFG SWGWRVPFVA SILLLGVSVW IRLQLNESPV FLRIKAEGKT SKAPLTEAFG
QWKNLKIVIL ALIGLTAGQA VVWYTGQFYA LFFLTQTLKV DGASANILIA IALLIGTPFF
LFFGSLSDKI GRKPIILAGC LIAALTYFPL FKALTHYANP QLELATQKAP ITVLADPATC
SFQFNPVGTS KFTSSCDIAK SALSKAGLNY ENVAAPAGTQ AEIKVGDTVI QTYDGKAADA
KAQGAAFDKT LASTLKGAGY PAKADPAQLN WPMTIVILTI LVIFVTMVYG PIAAMLVEMF
PTRIRYTSMS LPYHIGNGWF GGFLPATAFA IVAAKGNIYS GLWYPIVIAL ATFVIGLLFV
KETKDSDIYA QD