| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2587 |
|---|
| Symbol | |
|---|
| ID | 6124251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 2884573 |
|---|
| End bp | 2886099 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641639180 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase |
|---|
| Protein accession | YP_001765870 |
|---|
| Protein GI | 170733923 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.095859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGAA AGATGTTGAT CAAACCGTTC CGCTCGATCG AATCGGCGGC CACCGCGACG
CACAACTGGC GGCGCCGCCA GATCCTGCGC GCGGGGGCGT CGACGCTGGT GCTCGGTCTC
GTCGCGCCGC GGCTCGCGCA CGCGTCGTCG GTGCTCGGCG TGCGCGTGTG GCCCGCACGC
GATTACACGC GTGTCACGAT CGAATCCGAC CAGCCGCTGC AGAATAGTCA ACAGCTGCTG
CAGGGTCCCG ACCGTCTCGT CGTCGACCTG AGCGGCCTCG ACCTCGACCA GGCGCTGCGC
GACCTCGTAT CGAAGATCGC GCCGAACGAT CCGCAGATCC AGTCGGTGCG CGTCGGCCAG
TATCAGCCGC ACGTCGTGCG AATGGTGTTC GACCTGAAAG GCTCGGTGAA GCCGCAGGTG
TTCACGCTGC CGCCCGTCGG CACCTACAAG TACCGGCTCG TGTTCGACCT GTATCCGGCG
GTCGCGCCCG ATCCGCTGTC CGACCTGATC GCGCAGACGG AACGCAAGGA ACAGGCGCTC
AACGACACGA CGCGCGCGCA GCAGATGCAG CCGCCGTCCA CGCTGTCCGG CCCGGGCACG
CCCCCGCCAG GCGCGGGCGA CAACAGCGAC GCGTTCTTCC AGCGTTTCGC GCAGAACACG
CCGGCCACGC CGCACGCGCC GCCGGCCGCC GGCACGCCGT CGACGCCCGC GAAGCCGGCC
GTCAAGCCGC CGCCCGTCAT CGCGCGCCGC GACGACAGCG ACGACGGCGA CGACACCTAC
AAGTTCACCG CGCCGAAATC GGGCAAGGGC GGCACGGTAC GCCTGCTGAC GGTCGCGATC
GACCCCGGCC ACGGCGGCGA GGACCCGGGC GCGATCGGCG GCGGCGGCAC GTACGAGAAG
CATATCGCGC TCGACATCGC GAAGAAGCTG CGCGCGAAGA TCGACGCCGC GCCGAACATG
CGCGCGATGA TGACGCGCGA CGCCGACTTC TTCGTGCCGC TGAACGTGCG CGTGCAGAAG
GCGCGCCGCG TCGGCGCGGA TCTCTTCGTG TCGATCCACG CGGACGCGTT CACGACGCCG
TCCGCGCGCG GCTCGTCGGT GTTCGCGCTG TCCGACCACG GCGCGACGAG CGCCGCGGCG
CGCTGGATGG CGAACAAGGA GAATTCGTCG GACCTGATCG GCGGCATCAA CATCAAGACG
GCGGACGCGG CCGTGAACCG CGCGCTGTTC GACATGTCGA CGACCGCGCA GATCCGCGAC
TCGCTGCGCT ACGGCAACTA CGTGCTGAAG GAAGTCGGCG GCATCAACAA GCTGCACAAG
GGCTCGGTCG AGCAGGCCGG GTTCGCGGTG CTGAAGGCGC CCGACATTCC GTCGATCCTC
GTCGAGACCG CGTTCATCAG CAACCCGGAC GAAGAGCGCC GGCTCAACGA CGACAGCTAT
CGCGACGAGA TGGCCGACGC GATCTTCCGC GGCATCAAGC GCTATTTCGC CGCGAATCCG
CCGCTCGCGA AGAGCCGGAT GGCCTGA
|
|---|
| Protein sequence | MSRKMLIKPF RSIESAATAT HNWRRRQILR AGASTLVLGL VAPRLAHASS VLGVRVWPAR
DYTRVTIESD QPLQNSQQLL QGPDRLVVDL SGLDLDQALR DLVSKIAPND PQIQSVRVGQ
YQPHVVRMVF DLKGSVKPQV FTLPPVGTYK YRLVFDLYPA VAPDPLSDLI AQTERKEQAL
NDTTRAQQMQ PPSTLSGPGT PPPGAGDNSD AFFQRFAQNT PATPHAPPAA GTPSTPAKPA
VKPPPVIARR DDSDDGDDTY KFTAPKSGKG GTVRLLTVAI DPGHGGEDPG AIGGGGTYEK
HIALDIAKKL RAKIDAAPNM RAMMTRDADF FVPLNVRVQK ARRVGADLFV SIHADAFTTP
SARGSSVFAL SDHGATSAAA RWMANKENSS DLIGGINIKT ADAAVNRALF DMSTTAQIRD
SLRYGNYVLK EVGGINKLHK GSVEQAGFAV LKAPDIPSIL VETAFISNPD EERRLNDDSY
RDEMADAIFR GIKRYFAANP PLAKSRMA
|
|---|
| |