Gene Bcenmc03_2571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2571 
Symbol 
ID6124235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2869755 
End bp2870546 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID641639164 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_001765854 
Protein GI170733907 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.326733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCACC CGCCACCCTT CATCGCCGTC ATTCCCGCCC GGCTCGCGTC GACGCGGCTC 
CCGAATAAGC CGCTCGCCGA TCTCGGCGGC AAGCCGATGG TCGTGCGTGT CGCCGAGCGC
GCGCGCGAGG CGGGGGCACA GCAGGTGCTC GTCGCGTCCG ACGCGCAGAG CGTGCTCGAC
GCGGCGCGCG ATCACGGCTT CGAAGCGGTG CTCACGCGCG CCGACCATCC GTCCGGCACC
GACCGGCTCG CGGAAGTCGC CGCGGCCTTC GGCTGGCGCG ACGACACCGT CGTCGTCAAC
GTGCAGGGCG ACGAGCCGCT GATCGACCCC GTGCTCGTGC GCGACGTAGC GTCGCACCTG
GCCGCGCATC CGGCGTGCGC GATCGCGACC GCCGCTCACC CGATCCACGA CGCGGCCGAC
GTGTTCAATC CGAACGTCGT GAAGGTCGCG CTCGACGCGC AGAGCGTCGC GCTGTACTTC
TCGCGCGCGC CGATTCCGTG GAGCCGCGAC GCGTACCAGC CGCACTGGCC CGACGTCGCG
GCCATGCCTC CACCGGCTTT CCCGGTCTAT CGGCACATCG GCCTCTATGC ATATCGCGCG
CGTTTCCTGC GCACCTATCC GTCGCTCGCG CAGGCGCCGA TCGAACAGGC CGAGCAGCTC
GAACAGCTGC GCGCGCTGTG GCACGGCGAG CGCATCGCGG TGCTGATCAC CGAATCCGCG
CCCGAAGCCG GCATCGATAC GCCGGCCGAT CTCGCACGCG TGCAGGCCCT TTTTCAGCCG
GGTTCAAAAT AA
 
Protein sequence
MTHPPPFIAV IPARLASTRL PNKPLADLGG KPMVVRVAER AREAGAQQVL VASDAQSVLD 
AARDHGFEAV LTRADHPSGT DRLAEVAAAF GWRDDTVVVN VQGDEPLIDP VLVRDVASHL
AAHPACAIAT AAHPIHDAAD VFNPNVVKVA LDAQSVALYF SRAPIPWSRD AYQPHWPDVA
AMPPPAFPVY RHIGLYAYRA RFLRTYPSLA QAPIEQAEQL EQLRALWHGE RIAVLITESA
PEAGIDTPAD LARVQALFQP GSK