| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2542 |
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| Symbol | |
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| ID | 6124206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 2834579 |
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| End bp | 2835985 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641639135 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001765825 |
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| Protein GI | 170733878 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.072849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000187345 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTGGTGC AGGGGAGTGG TAACGCAGTG ACACAACAAC AACGGTCGTT CGACGCTATC
GTCGCGCGCG AACAAGGGTT GCGCCACGCG CTGACGTCGG GGCAGATGGC GATGATCGCG
ATCGGCGGCG CGATCGGCAC GGGGCTGTTC CTCGGCAGCG GGTTCGCGAT CGGGCTCGCG
GGCCCGAGCG TGCTGGTGTC CTATGCGATC GGCGCGCTGA TCGCGCTGCT GCTGATGGGC
GCGCTGGCGG AAATGACCGT CGCGCATCCG ACGGCCGGCT CGTTCGGCGC CTATGCCGAG
CACTACGTCG GCCCGCTCGC GGGCTTCCTG GTGCGCTACG CGTACTGGTT CGCGGTCGTG
TTCGCGATCG GCACCGAGAT CAGCGCGATC GCCGTGTTCA TGAAGTACTG GTTCCCGGCC
GTGCCCGGCT GGTACTGGGT GATCGGCTTC TCGGCGCTGC TGATCGCGGT GAACCTCGCG
AGCGTCACGC TGTACGGGAC GGTCGAATAC GCGTTCTCAC TGCTGAAGAT CGCGGCGATC
GTCGTGTTCA TCGTGCTCGG CGCGTATCTC GTGTGGGCGG CGCCGGTCGC ATCGGGCATC
GGTTTCGCGA ACTATACCGC GCACGGCGGC TTCATGCCGA AGGGGCCGTG GGGTACGTGG
GTCGCGGTGA TCGTCGCGAT CTTCAGCTAC ATGAGCATCG AAGCGGTCGC GATCGCGGCC
GGCGAGGCGC GCGATCCGCA GCACGCGGTC ACGCGCGCAT TCCGCTCGAC CGTGTTCCGG
CTCGTGCTGT TCTACCTGCT GACGCTCGCG CTGATGCTCG CGATCGTGCC GTGGACGCAG
GCCGGCACCG ACGAAAGCCC GTTCGTGAAG GTGATGGCCG CGACGCACGT GCCGTATGCG
GCCGGCGTGA TCAACTTCGT GCTGTTGATC GCGGCGCTGT CGGCGATGAA CAGCCAGCTC
TACGTGACGA CGCGGATGAT GTTCAGCCTG TCGCGCGCGC GCCTCGCGCC CGCGGTGTTC
GGCCGGCTCG GCGCGAACGG CGTGCCGCGG GCGGCGCTGT GGATCTCGAC GAGCGGCGTC
GCGGTGGCGG CCGTGCTGGT CGCGCTCGCG CCCGATACCG CGTTCACGGT GATGATGGCG
ATCGCGATGT TCGGCGCGCT GTTCACGTGG CTGATGATCT TCGTCACGCA TCTGCGGTTC
CGTGCGCGGT ATCGCGGGCC CGCGCTCGCG TTCCGGATGT GGGGGCACCC GTTCGGCAGC
CTGCTCGGCG CGGGGCTGGT CGCCGCGATC CTGCTGACGA CCGCGTTCAC GCGCGAATTC
CGGATGACCA TGGTGGTCGG CGTCGTGTTC GCCGTGCTGC TGACGCTCGC CTACGCGCTG
CATTACCGGC ACCAGCACGC GCGCTGA
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| Protein sequence | MVVQGSGNAV TQQQRSFDAI VAREQGLRHA LTSGQMAMIA IGGAIGTGLF LGSGFAIGLA
GPSVLVSYAI GALIALLLMG ALAEMTVAHP TAGSFGAYAE HYVGPLAGFL VRYAYWFAVV
FAIGTEISAI AVFMKYWFPA VPGWYWVIGF SALLIAVNLA SVTLYGTVEY AFSLLKIAAI
VVFIVLGAYL VWAAPVASGI GFANYTAHGG FMPKGPWGTW VAVIVAIFSY MSIEAVAIAA
GEARDPQHAV TRAFRSTVFR LVLFYLLTLA LMLAIVPWTQ AGTDESPFVK VMAATHVPYA
AGVINFVLLI AALSAMNSQL YVTTRMMFSL SRARLAPAVF GRLGANGVPR AALWISTSGV
AVAAVLVALA PDTAFTVMMA IAMFGALFTW LMIFVTHLRF RARYRGPALA FRMWGHPFGS
LLGAGLVAAI LLTTAFTREF RMTMVVGVVF AVLLTLAYAL HYRHQHAR
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