Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2538 |
Symbol | lspA |
ID | 6124202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2831334 |
End bp | 2831834 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641639131 |
Product | lipoprotein signal peptidase |
Protein accession | YP_001765821 |
Protein GI | 170733874 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.544386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000408677 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGAAGA CCCTGTCGAA ACCGGCCAGC GGCGCGCTCG CGCCCTGGCT CGGCATTTCG CTGATCGTGA TCCTGTTCGA CCAGTTGTCG AAGATCGCGA TCCTCAAAAC GTTCGCGTAC GGCGCGCAGC ATGCGCTGAC GTCGTTCTTC AACCTCGTGC TGGTGTACAA CCGCGGCGCC GCGTTCGGCT TCCTGTCGAC CGCGAGCGGC TGGCAGCGCT GGGCGTTCAC CGCGCTCGGC GTCGGCGCGA CGCTCGTGAT CTGCTTCCTG CTGAAGCGCC ACGGCCACCA GCGGCTGTTC AGCGTGTCGC TCGCGCTGAT CCTCGGCGGC GCGCTCGGCA ACGTGATCGA CCGGCTCGTC TACGGTCACG TGATCGACTT CCTCGATTTC CACCTCGGCG CGTGGCACTT CCCGGCGTTC AACCTTGCCG ATTCCGCGAT CACGGTCGGC GCGGTGCTGC TGATCTACGA CGAGCTGCGA CGCGTGCGCG GCGCGCGCTG A
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Protein sequence | MAKTLSKPAS GALAPWLGIS LIVILFDQLS KIAILKTFAY GAQHALTSFF NLVLVYNRGA AFGFLSTASG WQRWAFTALG VGATLVICFL LKRHGHQRLF SVSLALILGG ALGNVIDRLV YGHVIDFLDF HLGAWHFPAF NLADSAITVG AVLLIYDELR RVRGAR
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