Gene Bcenmc03_2538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2538 
SymbollspA 
ID6124202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2831334 
End bp2831834 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID641639131 
Productlipoprotein signal peptidase 
Protein accessionYP_001765821 
Protein GI170733874 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.544386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000408677 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGAAGA CCCTGTCGAA ACCGGCCAGC GGCGCGCTCG CGCCCTGGCT CGGCATTTCG 
CTGATCGTGA TCCTGTTCGA CCAGTTGTCG AAGATCGCGA TCCTCAAAAC GTTCGCGTAC
GGCGCGCAGC ATGCGCTGAC GTCGTTCTTC AACCTCGTGC TGGTGTACAA CCGCGGCGCC
GCGTTCGGCT TCCTGTCGAC CGCGAGCGGC TGGCAGCGCT GGGCGTTCAC CGCGCTCGGC
GTCGGCGCGA CGCTCGTGAT CTGCTTCCTG CTGAAGCGCC ACGGCCACCA GCGGCTGTTC
AGCGTGTCGC TCGCGCTGAT CCTCGGCGGC GCGCTCGGCA ACGTGATCGA CCGGCTCGTC
TACGGTCACG TGATCGACTT CCTCGATTTC CACCTCGGCG CGTGGCACTT CCCGGCGTTC
AACCTTGCCG ATTCCGCGAT CACGGTCGGC GCGGTGCTGC TGATCTACGA CGAGCTGCGA
CGCGTGCGCG GCGCGCGCTG A
 
Protein sequence
MAKTLSKPAS GALAPWLGIS LIVILFDQLS KIAILKTFAY GAQHALTSFF NLVLVYNRGA 
AFGFLSTASG WQRWAFTALG VGATLVICFL LKRHGHQRLF SVSLALILGG ALGNVIDRLV
YGHVIDFLDF HLGAWHFPAF NLADSAITVG AVLLIYDELR RVRGAR