Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2512 |
Symbol | |
ID | 6124176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2804698 |
End bp | 2805414 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641639105 |
Product | pseudouridine synthase |
Protein accession | YP_001765795 |
Protein GI | 170733848 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCG AAAGCATTCT CTACACCCAG GGCTTCGGCT CGCGCCGCCA GTGCCGCGGC CTGATCGAAG CGGGCCGCGT CGCCGTCGCG GGCGCCGCCG CGACCGACCC GGACGCCCCC TTCGACACCG CCGGCCTCGT GTTCTCGGTC GACGATACGG CATGGCCGTT CCATGCGCGC GCGTATCTCG CGCTCAACAA GCCGGCGGGC TACGAGTGTT CGCGCGATCC GCAGCACCAT GCGAGCGTGT TCAGCCTGCT GCCCGCGCCG CTCGTCGCAC GCGGCGTGCA ATGCGTGGGC CGGCTCGACC AGGACACGAC CGGCCTGCTG CTGCTGTCCG ACGACGGCCA GTTCGTGCAC GCGTACACGT CGCCGAAGCG CAAGGTGCCG AAGACCTACG TCGCGACCGT GCGCCACCCG CTCGACGACA CGCAACTGCA CGCGCTGCGC ACCGGCGTGC AACTGCATGG CGAACCGAAG CCGATCGCGG CCGTCGCCGC CGACGCCCGC GACACGCACG CACTCGCGCT GACCGTGCTC GAAGGCAAGT ACCACCAGGT CAAGCGGATG GTCGCCGCGG CGAGCAACCG CGTCGAATTG CTGCACCGCG AAAGCATCGG CGGGTTCGCA CTGCCGGCCG ACCTCGCGCC CGGCGCATGG CGGTGGCTCG ACGAAGCCGA CCTTGCCGCG CTGCGCAATC CGGTCAAAAC CCTGTAA
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Protein sequence | MDLESILYTQ GFGSRRQCRG LIEAGRVAVA GAAATDPDAP FDTAGLVFSV DDTAWPFHAR AYLALNKPAG YECSRDPQHH ASVFSLLPAP LVARGVQCVG RLDQDTTGLL LLSDDGQFVH AYTSPKRKVP KTYVATVRHP LDDTQLHALR TGVQLHGEPK PIAAVAADAR DTHALALTVL EGKYHQVKRM VAAASNRVEL LHRESIGGFA LPADLAPGAW RWLDEADLAA LRNPVKTL
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