Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2505 |
Symbol | |
ID | 6124169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2798651 |
End bp | 2799550 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641639098 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001765788 |
Protein GI | 170733841 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.337193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGAAG TCGTCCTCGT CACCGGCGCG TCCAGCGGCT TCGGCTTGCT GACGGCCCAG GCGCTCGCGC GCGCCGGTCA CACGGTCTAT GCATCGATGC GCGAGCGCGC CGGGCGCAAC GCGCCGCGCG CCGCCGCCGT CGCGGCCTAT GCGCAGGAAC ACGGCGTCGA CCTGCGCAGC CTCGAACTCG ACGTCGGCGA CGACGCATCG GTCGACGCCG CCATCGAGCG CGTGATCGCC GACAACGGCC GTCTGGACGT CGTCGTCCAC AACGCCGGCC ACATGGTGTT CGGGCCGGCC GAAGCCTTCA CGCCGGAGCA GCTTGCGCAG CTCTACGACG TCAACGTCGT GTCGACCCAG CGCGTGAACC GCGCGGCGCT GCCGCACCTG CGCCGCCAGG GCCGCGGCCT GCTCGTGTGG GTGTCGTCCT CGTCGGCGCG CGGCGGCACC CCGCCGTTCC TCGCCCCCTA CTTCGCCGCG AAAGCCGCGA TGGACTCGCT CGCGGTGTCC TACGCCGCCG AACTCGCCCG CTGGGGCATC GAAACGTCGA TCGTCGTGCC GGGCGCGTTC ACCCGAGGCA CGAATCACTT CCTCCATGCG GGCAAGCCGG CCGATACCGC CGTGCAGGCT GCGTACGACA GCGGGCCGTA CGCGGGCGTC GCCGAGCAGG CGTTGACGGG CCTCGCCGCG CTCGAACCGG CGGACGCCGA CGCCGGCGCC GTCGCCACGG CGATTGCCGA GCTCGTCGCG ACGCCGGCCG GCAAGCGCCC CTACCGCGTG TTCGTCGATC CGTCGCAGGA CGGCGCCGAG GAAGTGTTCC GCATCGGCGA TCGCATCCGC CGCGAGATGT TCCGGAACAT CGGGCTCGTC GATCTGCTCG CGCCGCGTGT CGGCGGCTGA
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Protein sequence | MKEVVLVTGA SSGFGLLTAQ ALARAGHTVY ASMRERAGRN APRAAAVAAY AQEHGVDLRS LELDVGDDAS VDAAIERVIA DNGRLDVVVH NAGHMVFGPA EAFTPEQLAQ LYDVNVVSTQ RVNRAALPHL RRQGRGLLVW VSSSSARGGT PPFLAPYFAA KAAMDSLAVS YAAELARWGI ETSIVVPGAF TRGTNHFLHA GKPADTAVQA AYDSGPYAGV AEQALTGLAA LEPADADAGA VATAIAELVA TPAGKRPYRV FVDPSQDGAE EVFRIGDRIR REMFRNIGLV DLLAPRVGG
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