Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2504 |
Symbol | |
ID | 6124168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2797870 |
End bp | 2798607 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641639097 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001765787 |
Protein GI | 170733840 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0547462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAT CGGAACAGGT CGCCGTCGTC ACGGGTTCGT CGCGCGGCAT CGGCGCGGAA ATCGCCCGCC AACTCGCCCG GGACGGCTTC CGGGTCGTCG TCAACTATGC CGGGAGCGCC GGCCCGGCCC GCGAAGTGGT CGACGCCATC GTCGCCGACG GCGGCCATGC GATCGCGGTG CAGGCGAACG TCGCCGACCC GGCGGCCGTG TCCGCGCTGT TCGACGCCGC GCAACACGCA TTCGGCGGCC TGGATGTGGT GGTCAATTCC GCGGGCGTGA TGAAGCTCGC GACCATCGCC GACTGCGACG ATGCGCTGTT CGACGAAACA CTCGCCATCA ACGTGAAGGG CACCTTCAAC GTCTGCCGCG AAGCGGCCAG GCAGGTGCGC GACGGCGGAC GCATCATCAA CCTGTCGACC AGCGTGATCG GCATGCGCAT GCCGACTTAC GGCGTGTACG TCGCCAGCAA AGCGGCGGTC GAAAGCCTCA CGCAGGTGCT TGCGCAGGAA ATGCGCGGGC GCGGCGTCCG CGTGAATGCC GTCGCGCCCG GGCCGGTCGC GACCGAGCTG TTCCTGCAGG GCAAGAGCCC GGAACTCGTC GAGCGGCTCG CGAAGCTGAA CCCGCTCGAG CGGCTCGGCC AGCCCGACGA CATCGCGCGC GTCGTCGCGT TCCTCGCCGG CCCGGACGGC GCGTGGATCA ACGGCCAGAT CCTGCGCGCC AACGGCGGCA TGTGCTGA
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Protein sequence | MSTSEQVAVV TGSSRGIGAE IARQLARDGF RVVVNYAGSA GPAREVVDAI VADGGHAIAV QANVADPAAV SALFDAAQHA FGGLDVVVNS AGVMKLATIA DCDDALFDET LAINVKGTFN VCREAARQVR DGGRIINLST SVIGMRMPTY GVYVASKAAV ESLTQVLAQE MRGRGVRVNA VAPGPVATEL FLQGKSPELV ERLAKLNPLE RLGQPDDIAR VVAFLAGPDG AWINGQILRA NGGMC
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