| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2500 |
|---|
| Symbol | |
|---|
| ID | 6124164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 2793244 |
|---|
| End bp | 2794410 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641639093 |
|---|
| Product | mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_001765783 |
|---|
| Protein GI | 170733836 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.952292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATCG TTGAAATCCG CGAGAAGACC GTTCCTATCA GTTCCCCCAT CCGCAACGCC
TATATCGACT TCAGCAAAAT GACGCTGAGT CTCGTCGCAG TCATCACCGA CGTGATCCGC
GACGGCAAAC CGGTGATCGG GTACGGCTTC AACTCGAATG GCCGCTACGG TCAGGGCAAG
CTGATGCGGG AGCGCTTCAT TCCGCGCATT CTCGAAGCGG ACCCCGCCTC GCTCATCGAC
GACGCGGGCG AGAATCTCGA TCCCCACAAG ATCTGGGCGA CGATGTTCAC CAACGAGAAG
CCCGGCGGTC ACGGTGAACG CTCGGTCGCT ATCGGCACAA TCGACATGGC GATCTGGGAT
GCAGTGGCGA AGATCGAAGG CAAGCCGCTG TTCCAACTGC TCGCGGACCG CTACGGCAAT
GGTCAACCGG ATCGCAAAAT TTTCGTGTAT GCGGCTGGCG GCTACTACTA CCCCGGCCAG
GATCACGAAA AGCTGAAGGA CGAGATGCGC AGCTATATCG ACCGTGGCTA TACGGTCGTG
AAGAAGAAGA TCGGCGGTGC GTCGCTCGAC GAAGACCTGC GCCGCATCGA CTCGATCCTG
AGCGTGCTGC AAGACGGCCA GAAACTCGCC GTCGATGCGA ATGGTCGCTT CGATCTCGAT
ACCGCGATTC AGTACGCGAA GGCGCTGTCG CAATACGACC TGTTCTGGTA TGAGGAGCCG
GGCGATCCGC TAGACTTCGA ACTGCAATCC ACGTTACGCA ACTACTATGA CAAGCCGATG
GCCACCGGCG AAGACCTGTT CTCGATGCAG GACGCGCGCA ACTTGATTCG CTATGGCGGC
ATGCGGCCCG ACCGCGACTG GCTGCAATTC GACTGCGCGC TGAGCTACGG CCTTGTGGAA
TACCTGCGCA CTTTGGACAT GCTGCGCCAG CACGGCTGGT CGCCGAGCCG GTGTATCCCG
CACGGCGGTC ACCAGATGTC GCTGAACATC GCCGCCGGCC TCGGCCTGGG GGGGAACGAG
TCCTATCCGG ACTTGTTCCA GCCGTATGGC GGCTTCCCCG ACGGCGTCAA GGTCGAAAAC
GGCTACATCT CCATGCCCGA TCTTCCGGGT ATCGGCTTCG AAGGAAAGTC AGATCTCATC
GCCGAAATGC GCAAGCTTTC GGCATAG
|
|---|
| Protein sequence | MKIVEIREKT VPISSPIRNA YIDFSKMTLS LVAVITDVIR DGKPVIGYGF NSNGRYGQGK
LMRERFIPRI LEADPASLID DAGENLDPHK IWATMFTNEK PGGHGERSVA IGTIDMAIWD
AVAKIEGKPL FQLLADRYGN GQPDRKIFVY AAGGYYYPGQ DHEKLKDEMR SYIDRGYTVV
KKKIGGASLD EDLRRIDSIL SVLQDGQKLA VDANGRFDLD TAIQYAKALS QYDLFWYEEP
GDPLDFELQS TLRNYYDKPM ATGEDLFSMQ DARNLIRYGG MRPDRDWLQF DCALSYGLVE
YLRTLDMLRQ HGWSPSRCIP HGGHQMSLNI AAGLGLGGNE SYPDLFQPYG GFPDGVKVEN
GYISMPDLPG IGFEGKSDLI AEMRKLSA
|
|---|
| |