| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2466 |
|---|
| Symbol | |
|---|
| ID | 6124130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2758377 |
|---|
| End bp | 2759291 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641639058 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001765749 |
|---|
| Protein GI | 170733802 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.708031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATC CTACCCCCGA CCTGCGCCAG TGGCGCTATT TCGTCACCGT CGCCGACGAG
CGCCATTTCG GCCGCGCGGC CGAGCGCCTG TCGATGACGC AGCCGCCGCT GTCGCAGGCG
ATCCGCGCGC TCGAGGACAC GCTGGGCGTC GCGCTGTTCG TGCGCACCAA GCGCTCGGTG
GCGCTGACGG CGGTCGGCGC GGCGCTGCTG CCGGACGTGC GCCGCCTGCT GGCGTCGGCC
GACGCGCTGC CGCCGCTCGC GCGGCGGCTC GCGCGCGGCG AGGCCGGTTC GCTGTCGCTC
GCGTTCGTGT CGACCGCCGA CTACGGGCTG CTGCCGTCGT TGCTGCGCGC GTTCGGCGCG
CGCTATCCGC AGGTGCGGCT GCAGCTCGCG GAAGCGACGA GCGACGTGCA GATCGACGAA
CTCGTCGCCG GGCGCATCGA TGCCGGGCTC GTGATTCCGC CCGTGCCGCC GCGACACGCG
GCCGGGCTGT CGTACCTGCC GGTGGTGCGC GAACCGCTGG TGGTCGCGAT GCCGGCGGGG
GTATCCGATG CGCCGGAGGA CGTGCCCGTG CAGCTCGCCG AGGTCGCCGC GTTGCCGCTC
GTGATCTTCC CGCGTCGTTT GGCGCCCGGC TTTTATGACA TCATTACGGG CTGCTACGGC
GCGGCGGGGG AAACCCCGCA CATCGGCCAG GAGGCGATCC AGATGCAGAC GATCGTCAGC
CTCGTGTCGG CCGGCATGGG CGTCGCACTG GTGCCGCAAT CGCTGCGTAA CCTGCGGCGC
ACCGGCGTGG TCTACCGGCC GCTCGCCGGC CCTGCGCCGG TCGTCGAGAC GGGCCTCGTG
TGGCGCACCG GCGACGTGAG CCCCGTGCTC GCCGGCTTCA TCGACGTCGT GCGCGCGCAA
GGTCTTGCCG CGTGA
|
|---|
| Protein sequence | MADPTPDLRQ WRYFVTVADE RHFGRAAERL SMTQPPLSQA IRALEDTLGV ALFVRTKRSV
ALTAVGAALL PDVRRLLASA DALPPLARRL ARGEAGSLSL AFVSTADYGL LPSLLRAFGA
RYPQVRLQLA EATSDVQIDE LVAGRIDAGL VIPPVPPRHA AGLSYLPVVR EPLVVAMPAG
VSDAPEDVPV QLAEVAALPL VIFPRRLAPG FYDIITGCYG AAGETPHIGQ EAIQMQTIVS
LVSAGMGVAL VPQSLRNLRR TGVVYRPLAG PAPVVETGLV WRTGDVSPVL AGFIDVVRAQ
GLAA
|
|---|
| |