Gene Bcenmc03_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2429 
SymbolhemC 
ID6124093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2715464 
End bp2716468 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content71% 
IMG OID641639020 
Productporphobilinogen deaminase 
Protein accessionYP_001765712 
Protein GI170733765 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0181] Porphobilinogen deaminase 
TIGRFAM ID[TIGR00212] porphobilinogen deaminase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.237637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCG AGACCCCCGC GGCCGGGCCG CAGCAGGCAC AGCCGCCCGC GACGTTGACG 
ATTGCTTCGC GCGAGAGCCG CCTGGCGATG TGGCAAGCCG AACATGTGCG TGATGCGCTG
CGCAAATTAT ATCCAGCTTG TGACGTGAAA ATCCTCGGGA TGACGACGCG CGGCGATCAG
ATTCTCGATC GCACGCTGTC GAAGGTCGGC GGCAAGGGCC TGTTCGTGAA GGAGCTGGAA
GCCGCGCTGG CCGACGGCCG CGCCGATCTC GCCGTGCATT CGCTGAAGGA CGTGCCGATG
GCGCTGCCCG ACGGCTTCTC GCTCGCGGCG ATCATGGAAC GCGAAGACCC GCGCGACGCC
TTCGTGTCGA ACGATTACGC GTCGCTCGAC GCGCTGCCGG CCGGCGCGGT CGTCGGCACA
TCGAGCCTGC GTCGCGAGGC GATGCTGCGG TCGCGTTATC CGCATCTCGA GGTCCTGCCG
CTGCGCGGCA ACCTCGACAC GCGGCTCGCG AAGCTCGACC GCGGCGACTA CGCGGCGATC
ATCCTCGCGG CCGCCGGCCT GAAACGCCTC GGCCTCGAAG CGCGGATTCG TGCGCTGCTC
GACGTCGAGG CCAGCCCGCC CGCGGCCGGC CAGGGCGCGC TCGGCATCGA GATCGCCGCG
CACCGGGACG ACGTCGCCGC GTGGCTCGCG CCGCTGCATG ACCCGCAGAC CGCGCTCGCG
GTCGAGGCCG AACGGATGGT GTCGCGCGCG CTCGGCGGCA GCTGCGAGGT GCCGCTCGCC
GCGCACGCGG TATGGCGCGC GGGCGAGCTG TACCTGACGG GACGCGTATC GACCACCGAC
GGCAAGCGCG TGCTGACGGC CGAGGAATGC GGCGCGGTCG TGACCGTCGC CGATGCGCTC
GCGCTCGGCC GCGCGGTGTC CGACGAACTC GAGGCGCAAG GCGCGCTCGA CATCGTCCAG
GCGCTGCTCG CGGGCTCGCA GGCCGCGGGC AAGGGCGACG CCTGA
 
Protein sequence
MNSETPAAGP QQAQPPATLT IASRESRLAM WQAEHVRDAL RKLYPACDVK ILGMTTRGDQ 
ILDRTLSKVG GKGLFVKELE AALADGRADL AVHSLKDVPM ALPDGFSLAA IMEREDPRDA
FVSNDYASLD ALPAGAVVGT SSLRREAMLR SRYPHLEVLP LRGNLDTRLA KLDRGDYAAI
ILAAAGLKRL GLEARIRALL DVEASPPAAG QGALGIEIAA HRDDVAAWLA PLHDPQTALA
VEAERMVSRA LGGSCEVPLA AHAVWRAGEL YLTGRVSTTD GKRVLTAEEC GAVVTVADAL
ALGRAVSDEL EAQGALDIVQ ALLAGSQAAG KGDA