Gene Bcenmc03_2414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2414 
Symbol 
ID6124078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2696447 
End bp2697523 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content65% 
IMG OID641639005 
Productouter membrane protein (porin)-like protein 
Protein accessionYP_001765697 
Protein GI170733750 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.200003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00381795 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGAAAG CTTTGGTCGC GGCCGCGCTG ATGGCTGCTG GGGTGGTGAC GGCGCACGCG 
CAGAGCAGCG TCACGCTGTA TGGCCGCCTG GATGCAGGCA TCGAGTACAT GAACGGCCTG
CAAAATGGCC ACCAAGTGCG CGCGGAAAGC GGCGACTGGG GCACGAGCCT GTGGGGCTTG
AAGGGTAGCG AGGACATCGG CGGCGGCAAC AAGATCCTGT TCCACCTCGA AGGCGCGTTC
AACACGATGA CGGGCGGCTT CAGCGGCTCG ATCTGGGATC GTTTCGCGAC CGTCGGTATC
TCGAACGACC GCTACGGTAC GCTGCTGTTG GGTCGCGAAC TCGCGATCGC CAACGGCGTG
TGGGACTTCG ACCCGTTCGG CCAGTCGGCC TGGTCGACGG CCTCGCTGGT GCGCGGCCGC
AACTGGAACA AGACCAGCAA CAACGTGTCG TACCAGTCGC CGTCGCTCTA CGGCCTCGAC
TTCTACGGCC AGTTCTCGTT CTCGAACTCG ACCAGCTTCA ACGGCAACAC GACGGCCGGC
CAACCGGGCC GTGCAATGGG CGGTCAGGTC ACCTACACGA ACTCGCTGTT CCAGTTGCGC
GGCATCTACG ACGAAACGCG CGACAGCAAC GGCCGCTTCT CGGACGTGTT CAACTACTCG
CGTGAATACT TCGCGGGCGT GAACGTGTTC CTCGGCCAGT TCAAGGTTCA GGCGGCCTAC
CAGGCATCGC GCGCCGACGG CAGCGGTGGC CCGGCAGTGA ACGCCGGCGT GACGGGTACG
CAACAGGTGT GGGGCGGTGT GACGTGGCAG GCCACGCCGG CAGCAGCGCT GATCGCGGCC
GTGTATCACG TGAACGCGAA CCACGGTGGC GGCAACGCGA ACATCTACAC GGTCGGCGGC
TCGTACAACA TCTCGAAGCG CACGCTGTTC GACCTGCAGG TCGCGACGGT GCGCAACAGC
TCGTCGGCCA ACTTCGGCCT GAACGCGAAC GGCGCCGGTA CGGCCGTCTC GACGGGCAAC
CCGCATCAGG GCGGCAGCCA GACCGGCGTC TACGCCGGCA TCCAGCACCT GTTCTGA
 
Protein sequence
MKKALVAAAL MAAGVVTAHA QSSVTLYGRL DAGIEYMNGL QNGHQVRAES GDWGTSLWGL 
KGSEDIGGGN KILFHLEGAF NTMTGGFSGS IWDRFATVGI SNDRYGTLLL GRELAIANGV
WDFDPFGQSA WSTASLVRGR NWNKTSNNVS YQSPSLYGLD FYGQFSFSNS TSFNGNTTAG
QPGRAMGGQV TYTNSLFQLR GIYDETRDSN GRFSDVFNYS REYFAGVNVF LGQFKVQAAY
QASRADGSGG PAVNAGVTGT QQVWGGVTWQ ATPAAALIAA VYHVNANHGG GNANIYTVGG
SYNISKRTLF DLQVATVRNS SSANFGLNAN GAGTAVSTGN PHQGGSQTGV YAGIQHLF