Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2414 |
Symbol | |
ID | 6124078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2696447 |
End bp | 2697523 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641639005 |
Product | outer membrane protein (porin)-like protein |
Protein accession | YP_001765697 |
Protein GI | 170733750 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.200003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00381795 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGAAAG CTTTGGTCGC GGCCGCGCTG ATGGCTGCTG GGGTGGTGAC GGCGCACGCG CAGAGCAGCG TCACGCTGTA TGGCCGCCTG GATGCAGGCA TCGAGTACAT GAACGGCCTG CAAAATGGCC ACCAAGTGCG CGCGGAAAGC GGCGACTGGG GCACGAGCCT GTGGGGCTTG AAGGGTAGCG AGGACATCGG CGGCGGCAAC AAGATCCTGT TCCACCTCGA AGGCGCGTTC AACACGATGA CGGGCGGCTT CAGCGGCTCG ATCTGGGATC GTTTCGCGAC CGTCGGTATC TCGAACGACC GCTACGGTAC GCTGCTGTTG GGTCGCGAAC TCGCGATCGC CAACGGCGTG TGGGACTTCG ACCCGTTCGG CCAGTCGGCC TGGTCGACGG CCTCGCTGGT GCGCGGCCGC AACTGGAACA AGACCAGCAA CAACGTGTCG TACCAGTCGC CGTCGCTCTA CGGCCTCGAC TTCTACGGCC AGTTCTCGTT CTCGAACTCG ACCAGCTTCA ACGGCAACAC GACGGCCGGC CAACCGGGCC GTGCAATGGG CGGTCAGGTC ACCTACACGA ACTCGCTGTT CCAGTTGCGC GGCATCTACG ACGAAACGCG CGACAGCAAC GGCCGCTTCT CGGACGTGTT CAACTACTCG CGTGAATACT TCGCGGGCGT GAACGTGTTC CTCGGCCAGT TCAAGGTTCA GGCGGCCTAC CAGGCATCGC GCGCCGACGG CAGCGGTGGC CCGGCAGTGA ACGCCGGCGT GACGGGTACG CAACAGGTGT GGGGCGGTGT GACGTGGCAG GCCACGCCGG CAGCAGCGCT GATCGCGGCC GTGTATCACG TGAACGCGAA CCACGGTGGC GGCAACGCGA ACATCTACAC GGTCGGCGGC TCGTACAACA TCTCGAAGCG CACGCTGTTC GACCTGCAGG TCGCGACGGT GCGCAACAGC TCGTCGGCCA ACTTCGGCCT GAACGCGAAC GGCGCCGGTA CGGCCGTCTC GACGGGCAAC CCGCATCAGG GCGGCAGCCA GACCGGCGTC TACGCCGGCA TCCAGCACCT GTTCTGA
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Protein sequence | MKKALVAAAL MAAGVVTAHA QSSVTLYGRL DAGIEYMNGL QNGHQVRAES GDWGTSLWGL KGSEDIGGGN KILFHLEGAF NTMTGGFSGS IWDRFATVGI SNDRYGTLLL GRELAIANGV WDFDPFGQSA WSTASLVRGR NWNKTSNNVS YQSPSLYGLD FYGQFSFSNS TSFNGNTTAG QPGRAMGGQV TYTNSLFQLR GIYDETRDSN GRFSDVFNYS REYFAGVNVF LGQFKVQAAY QASRADGSGG PAVNAGVTGT QQVWGGVTWQ ATPAAALIAA VYHVNANHGG GNANIYTVGG SYNISKRTLF DLQVATVRNS SSANFGLNAN GAGTAVSTGN PHQGGSQTGV YAGIQHLF
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