Gene Bcenmc03_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2408 
Symbol 
ID6124072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2690775 
End bp2691557 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID641638999 
Productcationic amino acid ABC transporter, periplasmic binding protein 
Protein accessionYP_001765691 
Protein GI170733744 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.503861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0134444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGG CCGCCCTGTG CGCCGCCCTC GCCCTCGTGG CGGGCAGCGC CTTCGCGAAG 
GAGTGGAAGA CCGTGCGGAT CGGCGTCGAT GCCAGCTACC CGCCGTTCGA GTCGACCGCG
CCGAGCGGCG AGATCGTCGG TTTCGACGTC GATCTCACCA AGGAAATCTG CAAGCGGATC
AACGTGAAGT GCGTGTGGGT GGCGCAGGAT CTCGACGGGA TCATCCCGGC GCTGAAGGCG
AAGAAGTACG ACGTCATCGT GTCGTCGCTG ACCGTGACGG ACAAGCGTCG CGAGCAGATC
GACTTCTCCG ACAAGGTGTA CGACGCGCCC GCGCGGATGA TCGCGAAAAC CGGCTCGCCG
CTGCTGCCGA CGGTCGCGTC GCTCAAGGGC AAGCGCGTCG GCGTCGAGCA GGGCTCCACG
CAGGAAACCT ACGCGAAGGC GTACTGGGAA CCGCAGGGCG TGACGATCGT TCCTTACCAG
AACCAGGACC AGGTCTATGC CGATCTCGGC ACGGGCCGCC TCGACGCGAC GCTGCAGGAT
GAACTGCAGG CCGACTACGG CTTCCTGCGC ACGCCGCGCG GCAAGGGCTT CGCGTTCGCC
GGGCCGGAAG TGAAGGATCC GAAGACGATC GGCGACGGCA CCGCGATCGG CCTGCGCAAG
GAAGACACCG ACCTGAAGCT GAGAATCAAC CAGGCGCTGG CCGACATGCA CAAGGACGGT
ACGTACGACC GGCTGTCGCA CAAGTACTTC TCGTTCAGCG TCTACTCGGC GCCGGCCCGC
TGA
 
Protein sequence
MKKAALCAAL ALVAGSAFAK EWKTVRIGVD ASYPPFESTA PSGEIVGFDV DLTKEICKRI 
NVKCVWVAQD LDGIIPALKA KKYDVIVSSL TVTDKRREQI DFSDKVYDAP ARMIAKTGSP
LLPTVASLKG KRVGVEQGST QETYAKAYWE PQGVTIVPYQ NQDQVYADLG TGRLDATLQD
ELQADYGFLR TPRGKGFAFA GPEVKDPKTI GDGTAIGLRK EDTDLKLRIN QALADMHKDG
TYDRLSHKYF SFSVYSAPAR