| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2405 |
|---|
| Symbol | |
|---|
| ID | 6124069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2688132 |
|---|
| End bp | 2688857 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641638996 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001765688 |
|---|
| Protein GI | 170733741 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.343281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0119317 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCC AGATCCTCAT CGTCGACGAC GACCAAGAAC TCCGAGACCT GCTGCGCGAC
TATCTCGTGC GCCAGGGGAT GGAAGTGTCC GTGCTGCACG ACGCGGCGAC GCTCGAGAAG
CGCCTCGAGC GCGAGCGGCC CGACCTGATC GTGCTGGACC TGATGATGCC GGGCGTGGAC
GGCCTGACCG CGCTGCGCCA GTTGCGCGCG GCCGGCGACG ACATCCCCGT GATCATGCTG
ACCGCGCGAG CGGACGACGT CGACCGCATC GTCGGGCTCG AGCTCGGCGC GGACGACTAC
CTCGGCAAGC CGTTCAACCC GCGCGAGCTG CTCGCGCGCG TGCAGGCCGT GCTGCGCCGC
CGCCGCGCGA CGCCGTCGGC GGCCGCGCCC GAGCAGCGCG AGCCGTTCGC GTTCGGCCGC
TTCCTGCTCG ACTTCCAGGC GCGCACGCTG TCGGTCGACG GCAAGCCGGC CACGCTGTCG
AGCAGCGAAT TCGCGCTGCT GAAGATCTTC GTGAACCACG CGCTGCGCAC GCTCACGCGC
GAGCGGCTGC TCGAGCTGCT GCACGGGCCC GAGTACGACG GCACCGACCG CGGCATCGAC
GTCCAGGTGT GGCGCCTGCG CCGCATCCTC GAAACGGATC CGTCGACGCC GCGCTTCATC
CAGACGGTCC GCGGGCGCGG CTACGTGTTC GTGCCCGACG GCGAGGCCCA TGCGCAAACC
CATTGA
|
|---|
| Protein sequence | MTTQILIVDD DQELRDLLRD YLVRQGMEVS VLHDAATLEK RLERERPDLI VLDLMMPGVD
GLTALRQLRA AGDDIPVIML TARADDVDRI VGLELGADDY LGKPFNPREL LARVQAVLRR
RRATPSAAAP EQREPFAFGR FLLDFQARTL SVDGKPATLS SSEFALLKIF VNHALRTLTR
ERLLELLHGP EYDGTDRGID VQVWRLRRIL ETDPSTPRFI QTVRGRGYVF VPDGEAHAQT
H
|
|---|
| |