| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2375 |
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| Symbol | |
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| ID | 6124039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 2655201 |
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| End bp | 2657573 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641638964 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001765658 |
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| Protein GI | 170733711 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCACG CGAGCAGGAC GCCGCCCTCT TCGATGAGCT CCGCCCGGTC CAACCACACG
CCGCCGAACC GGCCGCTGCG CGCGCCGCGC AAGTCGCGCC GGCGTGCGCT GTTCGCCATC
CCGCTGCTCG GGATGCTGGC GCTCGCGCTG CTGTGGGCCG TGATCATCGC GCGTCTGTCC
GTCGAAAAGG ACAGCGCGTA CAAGGAAGCG GCGGCCTCCG CGGCGATCCT GTCGTCCGCG
CTCGAGCAGC ATACGGTCAA GGCGATCCAC CAGGTCGACC AGATCACCCG CTTCGTCAAG
TTCGAATTCG AGAAATCGCC GGCGCGCTTC AATCTCGCGA GCGCCGTCGA GAAAGGCGTC
GTGCCGAGCG ACACGCTGAT CCAGGTCTCG CTCGTCAACG CGAAGGGCAT CCTGTTCGCG
AACACCGCCG AACTCCATCC GCAGCCGATC AACCTGTCCG ACCGCGAGCA CTTCAAGGTC
CACCTCGCGC ACAACGACGA CCGCCTCTTC ATCAGCAAGC CCGTGCTCGG CCGCGTGTCG
AGCCACTGGA CGCTGCAGAT GACGCGGCGC CTGAACAACC CGGACGGCAG CTTCGCGGGC
ATCGTCGTGG TGTCGGAAGA CCCGAGCTAC TTCACGAACG ATTTCTACAA CAACGCGGCC
ATCGGCAAGG AAGGCGTGAT CGCGGTCGTG TCCGATACGG GCGCGGTGCT CGCGCGGCGC
ACGGGCTCGG TGAGCAACGC GCCGGGCGCG TTTTCGGCGT CGGGCGTCTA CCCGATCGCC
GAGCGCGTGA CGGGCACGAT CATCGATCCG ATCGACGGCG TGACACGCAT CGTGTCGTAC
CGCCACCTCG ACGGCTACCC GCTCGCGGTG ATGGTCGGTC TGTCGCAGAC GGAAGAGTTC
GCGGACTACA CCCACACGCG CAACGTCTAC CTGCTGATGA CGAGCTTCAT CACGCTCGCG
ATGCTCGCGT TCTTCGGCGT CGCGACGGGC CTGATCGGCA AGCTGCTCGG CCGCGAGCGC
GAAATGACGC AGCTCGCCGA ATACGACCTG CTCACCGGCC TCGCGAACCG CTATGCGACG
CTGCGCGGGC TGCGCAACGA CGTGTCGATG CCCGCGAGCC TGTCGCGGCT CGGCCTGCTG
TTCATCGATC TCGACAACTT CAAGACCGTC AATGACACGC TCGGCCACAA CGCCGGCGAC
ATCGTGCTGC AGATGACCGC GTCGCGCCTG GCCGATGCGG TCGGCGACGA AGGCTCGCTC
GCGCGCATCG GCGGCGACGA GTTCGTCGTC GTGATGAAGG GCGACGACGT CGAGCGGCGC
GCGGTGCGGC TCGCGGAAGC GATCATCCGG ATGTTCGGCG AGCCGTTCGA CGTGCGCGGC
AGTTCGTTCG TGCTGCATGC GAGCATCGGC ATCGCGCTGC ACACCGTCGC GAACGAAAGC
GAGATCGACC TGCTGAAAAA GGCCGACCTC GCGATGTACA GCGCGAAGGA CGCCGGCAAG
AACTGCTACC AGTTCTATGC GCCGCACCTG TCGCACCGCG CCGACCACCT GATGCGCTGG
GAACAGCAAT TGCGCGTCGC GCTCGCCGAG GGGCAGCTGT TCCTCGCGTA CCAGCCGAAG
ATCGACCTCG CGCACCGCAC CATCACCGGC TTCGAGGCGC TTGCACGCTG GGATCACCCC
GAGCACGGCG TCATCTCCGC GAACGAATTC ATTTCGATCG CCGAATCGAC CGGCCTGATC
GTGCCGATCG GCGACTTCGT GATCCGCACC GCGTGCGAGC AGATCGCGCG CTGGCGCGAC
GAAGGCCACG ACACGCTCAC GCTCGCGGTC AACATCTCGC CCGTGCAGTT CTGGCGCGGC
GACCTGATCG AGACGATCTC GCAGGCGCTG CAGGACACCG GCATCCCCGC GAACCGGCTC
GAGATCGAGA TCACCGAGAC CGCGATGATG GAATATCCGG AGCTCGTGTC CGAGAAGATC
GTCGCGCTGA AAAAGCTCGG CATCCGGATT GCGCTCGACG ATTTCGGCAC CGGCTATTCG
TCGCTGTCGT ACCTGCACCG CTTCTCCGTC GACACGCTGA AGGTCGACCG CTCGTTCGTG
CAGGCGATTC CGAACGACCG CAGCGTGTGC GTGATGGTGT CGTCGATCGT ACATCTCGCG
CGCTCGCTCG GGCTGACCGT CGTCGTCGAG GGCACGGAGA CCGAGGAGCA GATCACGTGG
TTGTCCGCGC TCGGCGAAAT CGAGGCGCAA GGCTTCCTGT TCTCGCGCCC GGTGCCGGCC
GATGCGATTC CCGCGCTGAT CGCCCGCTTC GGCGTACGCG GCGAGCATCC GAATGTCGTC
GCGCATCGCG CGACCGGCAG CACGGGTGCC TGA
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| Protein sequence | MAHASRTPPS SMSSARSNHT PPNRPLRAPR KSRRRALFAI PLLGMLALAL LWAVIIARLS
VEKDSAYKEA AASAAILSSA LEQHTVKAIH QVDQITRFVK FEFEKSPARF NLASAVEKGV
VPSDTLIQVS LVNAKGILFA NTAELHPQPI NLSDREHFKV HLAHNDDRLF ISKPVLGRVS
SHWTLQMTRR LNNPDGSFAG IVVVSEDPSY FTNDFYNNAA IGKEGVIAVV SDTGAVLARR
TGSVSNAPGA FSASGVYPIA ERVTGTIIDP IDGVTRIVSY RHLDGYPLAV MVGLSQTEEF
ADYTHTRNVY LLMTSFITLA MLAFFGVATG LIGKLLGRER EMTQLAEYDL LTGLANRYAT
LRGLRNDVSM PASLSRLGLL FIDLDNFKTV NDTLGHNAGD IVLQMTASRL ADAVGDEGSL
ARIGGDEFVV VMKGDDVERR AVRLAEAIIR MFGEPFDVRG SSFVLHASIG IALHTVANES
EIDLLKKADL AMYSAKDAGK NCYQFYAPHL SHRADHLMRW EQQLRVALAE GQLFLAYQPK
IDLAHRTITG FEALARWDHP EHGVISANEF ISIAESTGLI VPIGDFVIRT ACEQIARWRD
EGHDTLTLAV NISPVQFWRG DLIETISQAL QDTGIPANRL EIEITETAMM EYPELVSEKI
VALKKLGIRI ALDDFGTGYS SLSYLHRFSV DTLKVDRSFV QAIPNDRSVC VMVSSIVHLA
RSLGLTVVVE GTETEEQITW LSALGEIEAQ GFLFSRPVPA DAIPALIARF GVRGEHPNVV
AHRATGSTGA
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