Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2336 |
Symbol | dnaE |
ID | 6124000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2609681 |
End bp | 2613208 |
Gene Length | 3528 bp |
Protein Length | 1175 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641638925 |
Product | DNA polymerase III subunit alpha |
Protein accession | YP_001765619 |
Protein GI | 170733672 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.388567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0606341 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGATC CTCGCTTCGT CCATCTTCGC GTCCACTCCG AATTCTCGAT TGCCGACGGC ATCGTGCGCA TTGACGACAT CGTCAAGGCG GCCGCCGCGG ACGGTCAGGG CGCGCTCGCG CTCACCGATC TCGGCAACGC GTTCGGCCTC GTTCGTTTCT ACCAGGAAGC CCGCGGCAAG GGCATCAAGC CGATCGCCGG CTGCGACGTC TGGATTGCCA ATCCGGACGA CCGCGACAAG CCGTCGCGGT TGCTGCTGCT GGTCAAGGAC AAGGTCGGTT ACCTGAATCT CTGCGAGCTG CTGTCGAAGG CGTGGCTCAC GAACCAGTAC CGCGGCCGCG CGGAACTCGA CGCGAGCTGG CTCGACGGCG AGCTCGCGCA GGGGCTGCTC GCGCTGTCGG GCGCGCAACA GGGCGATATC GGTCTTGCGC TGGCCGCGGG CAACGAAGAA GCCGCACGCC GTCACGCCGA GCGCTGGGCG CGGGTGTTTC CGGGCGGCTT CTACATCGAG CTGCAGCGTT ACGGCCAGCC GGGTGCCGAG GCGTACATCC AGCAGGCGGC GGCGCTCGCC GCGTCGCTGA AGCTGCCGGT CGTCGCGACG CACCCGACGC AGTTCATGAC CGACGACGAT TTCACCGCGC ACGAGGCGCG CGTGTGCATC TCGGAAGGCG ACATCCTCGC GAACCCGCGG CGCCAGAAGC GTTTCACGAC CGACCAGTAT TTCCGCACGC AGGACGAGAT GGCCGCGCTG TTCGCCGACC TGCCGTCGGC GATCGCGAAC ACGGTCGAGA TCGCGAAGCG CTGCAACCTG AAGCTCGAGC TCGGCAAGCC GAAACTGCCG CTGTTCCCGA CGCCGGACGG CATGTCGCTC GACGACTACC TGGTCCAGTT GTCGAAGGAA GGGCTCGAGG CCCGTCTCGC GCAGTTGTAT CCGGTCGAGG CCGAGCGCGA CGCGCAGCGC GACACGTACT ACAAGCGCCT CGAATTCGAG TGCGGGACCA TCACGAAGAT GGGCTTCCCC GGCTACTTCC TGATCGTCGC GGACTTCATC AACTGGGCGA AGAACAACGG CGTGCCGGTC GGCCCGGGCC GCGGCTCGGG CGCCGGCTCG CTGGTCGCGT ACGCGCTCGG CATTACCGAC CTCGATCCGC TGCGCTACAA CCTGCTGTTC GAGCGCTTCC TGAACCCGGA GCGCGTGTCG ATGCCCGACT TCGACATCGA CTTCTGCCAG CACGGCCGCG ATCGCGTGAT CCAGTACGTG AAGGAGAAGT ACGGCGCGGA CGCCGTCTCG CAGATCGCCA CGTTCGGCAC GATGGCCGCG AAGGCGGCCG TGCGCGACAT CGGTCGCGTG CTCGACCTCG GCTACATGTT CACCGACGGC ATCGCGAAGC TGATTCCGTT CAAGCCCGGC AAGCATGTGA CGATTGCCGA CGCGATGAAG GAAGAGCCGC AGCTGCAGGA GCGCTACGAC CACGAGGACG AAGTTCACCA GCTGCTCGAC CTCGCGCAGC GCGTCGAGGG TCTCACGCGT AACGTCGGGA TGCACGCTGG CGGCGTGCTG ATCGCGCCCG GCAAGCTGAC CGATTTCTGC CCGCTGTACA CGCAGGGCGA CGACGGCGGC GTGGTCAGCC AGTACGACAA GGACGACGTC GAAGCCGTCG GCCTCGTGAA GTTCGACTTT CTGGGCCTCA CGACGCTGAC GATCCTCGAC TGGGCCGAGC GCTACATCCG CCGCCTCGAT TCGTCGAAGG CCGACTGGTC GCTCGCCCAG GTGCCGCTCG ACGATCCAGC CTCGTTCCAG ATCCTGAAGA AGGCGAACAC GGTCGCGGTG TTCCAGCTGG AAAGCCGCGG GATGCAGGGC ATGCTGAAGG ATGCGCAGCC CGACCGCTTC GAGGACATCA TCGCGCTCGT GTCGTTGTAC CGTCCGGGCC CGATGGACCT GATTCCGAGC TTCTGCGCGC GCAAGCACGG GCGCGAGAAG GTCGACTATC CGGACCCGCG CGTCGAACCC GTCCTGAAAG AGACCTACGG CATCATGGTC TATCAGGAGC AGGTGATGCA GATGGCGCAG ATCATCGGCG GCTACTCGCT CGGCGGCGCC GATTTGCTGC GTCGTGCGAT GGGCAAGAAG AAGCCCGAGG AGATGGCCAA GCACCGCGAG ATCTTCGCCG AGGGTGCGGC GAAGAACGGC CTCACGCGCG AGAAGTCCGA CGAGATCTTC GACTTGATGG AGAAGTTCGC GGGCTACGGC TTCAACAAGT CGCACGCGGC CGCGTATGCG CTGCTCGCGT ATTACACCGC GTGGCTGAAG GCGCACCATC CGGCCGAATT CATGGCGGCC AACATGACGC TCGCGATGGA CGACACCGAC AAGGTGAAGA TCCTGTTCGA CGACTGCGTC GTGAACAACC TCGCCGTGCT GCCGCCGGAC ATCAACCAGT CGCATTACCG GTTCGAGCCG GTCGCGGAAG CCGACGGCAA GCGCTCGCGC ACGATCCGCT ACGGCCTTGG CGCGGTGAAG GGCAGCGGCC AGAACGCGAT CGAGGAAATC CTGCGTGCGC GCGAGGAAAA GGCGTTCACC GACCTGTTCG ACTTCTGCGA ACGGATCGAC CGGCGCGTCG TCAACCGCCG CACGGTCGAG GCGCTGATCC GCGCCGGCGC GTTCGATTCG CTGAACCCGA ACCGTGCGCA GCTGATCGCG TCGGTGCCGC TCGCGATGGA AGCGGCCGAC CAGGCCGAAG CGAACGCGAT GCAGGCCGGC CTGTTCGACA TGGGCGCCGA GTCGCCGCAT GCGCTCGTCG ACGAGCCCGC GTGGGACGAC AAGCGCCGCC TGCAGGAAGA AAAGGCCGCG CTCGGCTTCT ACCTGTCCGG CCACCTGTTC GATGCGTATC GCGACGAAGT GCGGCGCTTC GTGCGGCAGA AGGTCGGTGA TCTGAAGGAA GGGCGCGACA AGCTCGTCGC CGGCATCATC GCGTCGCTGC GCACGCAGAT GACCCAGCGC GGGAAGATGC TGATCGCGCT GCTCGACGAC GGCACGGGCC AGTGCGAGAT CACGATCTTC AACGAACAGT TCGAGGCAAA CAAGGCGCTG TTCAAGGAAG ACGAGCTGCT GATCGTGCAA GGGCAGGCGC GCAACGACGC ATTCACCGGC GGCATTCGCT TCACGGCCGA TACCGTGATG GATCTCGAGC GCGCGCGCAG CCGCTACGCG CAGGCCGTGC GGTTGACGAT GAACGGCAAC GCCGACGCGC TCGCGCTGCG CCGCGTGCTC GAGCCGCACG TGTCGAAGGA CGATCCGGCC GCCGCGAACG TGGTCGACGC GCCCGCGCCG CGCGGCGGCG GCCGCGATGG CGGTCGGCGC CCGCCGCCGC CGCTGCCGAA CGGGCTTGCG GTCCAGATCC ACTACAGCAA CGCGCGCGCG CAAGGCGAAA TGCGTCTGGG CGACGCGTGG CGCGTGAAGC CGAGCGACGT GCTGCTGGCG GAGCTGCGTG CGGCGTTCGA CGGCAGCGTC GTCGAAATCA CGTACTGA
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Protein sequence | MSDPRFVHLR VHSEFSIADG IVRIDDIVKA AAADGQGALA LTDLGNAFGL VRFYQEARGK GIKPIAGCDV WIANPDDRDK PSRLLLLVKD KVGYLNLCEL LSKAWLTNQY RGRAELDASW LDGELAQGLL ALSGAQQGDI GLALAAGNEE AARRHAERWA RVFPGGFYIE LQRYGQPGAE AYIQQAAALA ASLKLPVVAT HPTQFMTDDD FTAHEARVCI SEGDILANPR RQKRFTTDQY FRTQDEMAAL FADLPSAIAN TVEIAKRCNL KLELGKPKLP LFPTPDGMSL DDYLVQLSKE GLEARLAQLY PVEAERDAQR DTYYKRLEFE CGTITKMGFP GYFLIVADFI NWAKNNGVPV GPGRGSGAGS LVAYALGITD LDPLRYNLLF ERFLNPERVS MPDFDIDFCQ HGRDRVIQYV KEKYGADAVS QIATFGTMAA KAAVRDIGRV LDLGYMFTDG IAKLIPFKPG KHVTIADAMK EEPQLQERYD HEDEVHQLLD LAQRVEGLTR NVGMHAGGVL IAPGKLTDFC PLYTQGDDGG VVSQYDKDDV EAVGLVKFDF LGLTTLTILD WAERYIRRLD SSKADWSLAQ VPLDDPASFQ ILKKANTVAV FQLESRGMQG MLKDAQPDRF EDIIALVSLY RPGPMDLIPS FCARKHGREK VDYPDPRVEP VLKETYGIMV YQEQVMQMAQ IIGGYSLGGA DLLRRAMGKK KPEEMAKHRE IFAEGAAKNG LTREKSDEIF DLMEKFAGYG FNKSHAAAYA LLAYYTAWLK AHHPAEFMAA NMTLAMDDTD KVKILFDDCV VNNLAVLPPD INQSHYRFEP VAEADGKRSR TIRYGLGAVK GSGQNAIEEI LRAREEKAFT DLFDFCERID RRVVNRRTVE ALIRAGAFDS LNPNRAQLIA SVPLAMEAAD QAEANAMQAG LFDMGAESPH ALVDEPAWDD KRRLQEEKAA LGFYLSGHLF DAYRDEVRRF VRQKVGDLKE GRDKLVAGII ASLRTQMTQR GKMLIALLDD GTGQCEITIF NEQFEANKAL FKEDELLIVQ GQARNDAFTG GIRFTADTVM DLERARSRYA QAVRLTMNGN ADALALRRVL EPHVSKDDPA AANVVDAPAP RGGGRDGGRR PPPPLPNGLA VQIHYSNARA QGEMRLGDAW RVKPSDVLLA ELRAAFDGSV VEITY
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