| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2327 |
|---|
| Symbol | |
|---|
| ID | 6123991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 2599251 |
|---|
| End bp | 2600510 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641638916 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001765610 |
|---|
| Protein GI | 170733663 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0588452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.321822 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCA AGCATTCCGT CAGCGTGCGC AGTCTCCGGG CCCTCGACTG GCTCAACTTT
TTCGTTGCAA ACGTTCAAAC CGGGTTCGGT CCGTTCATCG CGTCCTACCT CGCGTCGCAC
AAGTGGACGC AGGGCGAGAT CGGCATGGTG CTGTCGATCG GCACGATCAG CGCGATGGTC
AGCCAGGTGC CGGGCGGCGC GGCCGTCGAT GCGCTGAAGA ACAAGAAAGG CGCGGCCGCG
TGGGCGATCG CGGCCATCAT CCTGTCCGCG GTCCTGCTCG CGTCCAGCCC GACGATCGTG
CCGGTGATCG CCGCCGAGGT GTTCCACGGC TTTGCAAGCT GCATGCTGGT GCCGGCGATG
GCCGCGATCT CGTTCTCGCT CGTCGGTCGC GCCGACCTCG GCGACCGGCT CGGCCGCAAC
GCGCGCTGGG CGTCGATCGG CAGTGCGGTC GCGGCGGGCC TGATGGGGCT CACCGGCGAA
TACTTCTCCG CGCGCGCGGT GTTCTGGCTG ACCGCCGTGC TGGCGCTGCC CGCGCTGTTC
GCGCTCGCGA TGATCCAGCC GACGCACCAG GTGATTCCGC AGTCGTCGAA GCCTGACGAG
CTCGACGAAG CCGGCGAGCG CGAAACGCTG CTCGAACTGC TGCGCGACCG CCGGATGCTG
ATCTTCGCGG CCTGCGTCGT GCTGTTCCAC CTGTCGAACG CCGCGATGCT GAACCTCGCG
GCCGGCGAAG TCACGGCCGG GATGGGCGAG AACGTGCAGC TCGTGATCGC CGCGTGCATC
ATCGTGCCGC AGGCGATCGT CGCGATGCTG TCGCCGTGGG TCGGCCGCTC CGCGCAGCGC
TGGGGGCGCC GGCCGATCCT GCTGCTCGGC TTCTCCGCGC TGCCGGTGCG CGCACTGCTG
TTCGCCGGCG TCAGCAGCCC GTACCTGCTC GTGCCGGTGC AGATGCTCGA CGGCATCAGC
GCGGCCGTGT TCGGCGTGAT GCTGCCGCTG ATCGCGGCCG ACGTCGCGGG CGGCAAGGGC
CGCTACAACC TGTGTATCGG GCTGTTCGGG CTCGCGGCCG GGATCGGCGC GACGCTCAGC
ACGGCCGTGG CCGGCTACGT CGCCGACCAC TTCGGCAACG CGGTCAGTTT CTTCGGGCTC
GCGGCCGCCG GCGCGCTCGC GGTGCTGCTG GTCTGGCTCG TGATGCCCGA AACGCGCGTC
GAGAACGGCG ATGCGACGGC CGACGAACCG GCCGCCGCTT CGCCCGAACA GGCGCATTGA
|
|---|
| Protein sequence | MTIKHSVSVR SLRALDWLNF FVANVQTGFG PFIASYLASH KWTQGEIGMV LSIGTISAMV
SQVPGGAAVD ALKNKKGAAA WAIAAIILSA VLLASSPTIV PVIAAEVFHG FASCMLVPAM
AAISFSLVGR ADLGDRLGRN ARWASIGSAV AAGLMGLTGE YFSARAVFWL TAVLALPALF
ALAMIQPTHQ VIPQSSKPDE LDEAGERETL LELLRDRRML IFAACVVLFH LSNAAMLNLA
AGEVTAGMGE NVQLVIAACI IVPQAIVAML SPWVGRSAQR WGRRPILLLG FSALPVRALL
FAGVSSPYLL VPVQMLDGIS AAVFGVMLPL IAADVAGGKG RYNLCIGLFG LAAGIGATLS
TAVAGYVADH FGNAVSFFGL AAAGALAVLL VWLVMPETRV ENGDATADEP AAASPEQAH
|
|---|
| |