| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2296 |
|---|
| Symbol | |
|---|
| ID | 6123960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 2567686 |
|---|
| End bp | 2568444 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641638885 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001765579 |
|---|
| Protein GI | 170733632 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCGA AACCTCCCCG CCGCACCCGC GAACGGATTC TCGAGTTGTC GTTGAAACTC
TTCAACGAGA TCGGCGAGCC GAACGTCACC ACCACGACGA TCGCCGAGGA AATGGAAATC
AGTCCAGGCA ACCTGTACTA CCATTTCCGC AACAAGGACG ACATCATCAA CAGCATCTTC
GCGCAGTTCG AGCAGCAGAT CGAACGGCGG CTGCGCTTCC CCGAAGATCA CCGTCCGACG
ATCGACGAAA CCTGGTCGTA CCTGCAGTAC ATGGCCGATT TCATGTGGAC CTACCGGTTC
CTGTATCGCG ACCTCAACGA CCTGCTCGCG CGCAACCGCA CGCTCGAGAC GCACTTCAAG
CAGATCATCA GCCACAAGGT GCGCTTCGCG CACGACATGT GCGAGTTGCT CGTCTCCGAT
GCCGAAATGG TCGCAACGCC CGCCGAGATC GAAGTCATTG CCACCAACAT GGCGGTGATC
TCGACCTACT GGCTGTCGTA CCAGTACGTG ATGCATCCGC GCAAATACAA CGACCAGGAC
GCGATCCGCG AAGAGCTGCA CCAGGTGAGC ATGCACGTGA TCTCGATCAT GGCCCCGTAC
CTGCGCGGCC GTTCACGCCA GCTGTTCGAC GACCTCGTCT CCGGCAAGCT GCCCAAGCGC
CAGTTCACCG ACTACCTGCC GCCGCGCGAC GGCTCCCCGC GCCCCGCCGA CAGCCCCGTC
GTCACCGGGC AGGCGTCCGC CAAGGATTCC AAGCAATGA
|
|---|
| Protein sequence | MEAKPPRRTR ERILELSLKL FNEIGEPNVT TTTIAEEMEI SPGNLYYHFR NKDDIINSIF
AQFEQQIERR LRFPEDHRPT IDETWSYLQY MADFMWTYRF LYRDLNDLLA RNRTLETHFK
QIISHKVRFA HDMCELLVSD AEMVATPAEI EVIATNMAVI STYWLSYQYV MHPRKYNDQD
AIREELHQVS MHVISIMAPY LRGRSRQLFD DLVSGKLPKR QFTDYLPPRD GSPRPADSPV
VTGQASAKDS KQ
|
|---|
| |