Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2285 |
Symbol | |
ID | 6123949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2557825 |
End bp | 2558469 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641638874 |
Product | phosphatidylserine decarboxylase |
Protein accession | YP_001765568 |
Protein GI | 170733621 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.786265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTATC CTCATCCGAT CATCGCGCGC GAAGGCTGGC CGTTCATCGC GATTGCAGCC GTCGTCGCGC TGTTGATCCA TGCCGTCGGG GGCTTCGGCT TCGCGTGGCC GTTCTGGCTG CTGCTCGTCT TCGTCGTCCA GTTCTTCCGC GATCCGCAGC GCCCGATCCC GGCGCAGCCG AACGCCGTGC TGTGCCCGGC GGACGGCCGC ATCGTCGCGG TCGAGACCGC GCAGGATCCG TACGCGAACC GCGAAGCGCT GAAGATCAGC GTGTTCATGA ATGTCTTCAA TGTCCATTCG CAGCGTTCGC CGGTCGATGG CGCGATCAGC AAGGTCGAGT ATTTCCCGGG TGCGTTCCTG AACGCGGCGA TCGACAAGGC GTCGACGGAG AACGAGCGCA ATGCGGTCGT GATCCAGACG GCGAGCGGCA AGACCGTCAC GTCCGTGCAG ATCGCCGGCC TGATCGCCCG CCGGATCCTC TGCTACGTGC GCGCCGGTGA GCCGCTGTCG CGCGGCCAGC GTTACGGGTT CATCCGCTTC GGTTCGCGCG TCGACGTGTA CCTGCCGCTC GGCAGCCGCG CGAAGGTGTC GATCGGCGAG AAGGTCTACG CGTCGTCGAC GATCCTCGCC GAGCTCGAGC AGTAA
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Protein sequence | MNYPHPIIAR EGWPFIAIAA VVALLIHAVG GFGFAWPFWL LLVFVVQFFR DPQRPIPAQP NAVLCPADGR IVAVETAQDP YANREALKIS VFMNVFNVHS QRSPVDGAIS KVEYFPGAFL NAAIDKASTE NERNAVVIQT ASGKTVTSVQ IAGLIARRIL CYVRAGEPLS RGQRYGFIRF GSRVDVYLPL GSRAKVSIGE KVYASSTILA ELEQ
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