| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2271 |
|---|
| Symbol | |
|---|
| ID | 6123935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2543227 |
|---|
| End bp | 2543829 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641638859 |
|---|
| Product | NADH dehydrogenase subunit C |
|---|
| Protein accession | YP_001765554 |
|---|
| Protein GI | 170733607 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00136652 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.138518 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCA AAATCGAGAC CCTCAAGGCA AACCTCGAAG CCGCGCTCGG CGCGCGCGTG
GTGAGCCTCA CCGAAGCGAT CGGTGAACTG ACGCTCGTCG TGAAGGCGAG CGATTACCTC
GAAGTCGCAA AGACGCTGCG CGACGATCCG AAGCTCCGTT TCGAGCAACT GATCGACCTC
TGCGGCGTCG ACTACCAGAC CTTCGGCGAC GGCGCCTACG ACGGCCCGCG CTTCGCGGCC
GTGTCGCACC TGCTGTCGGT CACGAACAAC TGGCGCCTGC GCCTGCGCGC ATTCGCGCCG
GACGACGATC TGCCGATCGT GGCGTCGCTG GTCGACATCT GGACCTCGGC GAACTGGTAC
GAGCGCGAAG CGTTCGACCT GTACGGCATC GTGTTCGAAG GCCACCCCGA CCTGCGCCGC
ATCCTCACCG ACTACGGCTT CATCGGTCAC CCGTTCCGCA AGGACTTCCC GGTGTCGGGC
TACGTCGAAA TGCGTTACGA CCCGGAAGAG AAGCGGGTCG TGTACCAGCC GGTGACGATC
GAGCCGCGCG AAATCACGCC GCGCGTGATC CGCGAGGATC GCTATGGCGG TCTGAAACAT
TAA
|
|---|
| Protein sequence | MASKIETLKA NLEAALGARV VSLTEAIGEL TLVVKASDYL EVAKTLRDDP KLRFEQLIDL
CGVDYQTFGD GAYDGPRFAA VSHLLSVTNN WRLRLRAFAP DDDLPIVASL VDIWTSANWY
EREAFDLYGI VFEGHPDLRR ILTDYGFIGH PFRKDFPVSG YVEMRYDPEE KRVVYQPVTI
EPREITPRVI REDRYGGLKH
|
|---|
| |