| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2214 |
|---|
| Symbol | |
|---|
| ID | 6124926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2481591 |
|---|
| End bp | 2483606 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641638797 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_001765497 |
|---|
| Protein GI | 170733550 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.397969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACGC ATCGACTGAT ACGCGCATAC GCGCTCTACA CGCTTGGGTT TCTCGGCTTC
GTGCTGCTGA TGTGGCGGAT CGAGCGCGCG ACGGGCTCGG GCGTCTGGAT CGGCTATGTG
TTCCTGTTCG TGCCGATCGC CGTGTACGCG GTGATCGGCT TGTTGTCGCG CACGTCCGAT
CTCGTCGAGT ACTACGTGGC CGGGCGGCGC GTGCCGTCCG CGTTCAACGG GATGGCGACG
GCGGCCGACT GGCTGTCGGC CGCGTCGTTC ATCGGCCTGG CCGGCTCGCT CTACGCGACC
GGTTACGACG CGCTCGCGTA CGTGATGGGC TGGACGGGCG GGTTCTGCCT CGTCGCGTTC
CTGCTTGCGC CGTATGTGCG CAAGCTCGCG CGTTACACGA TTCCCGACTT TCTCGGCACG
CGCTTCTCGA GCACGGCCGT GCGTGCGCTT GCGGCCGGCG CGGCGATCCT GTGTTCGTTC
GTGTACCTCG TCGCGCAGAT CCAGGGGATC GGCCTGATCG CGACGCGCTT CATCGGCGTC
GATTTCGCGA TCGGCATCTT CTGCGGGCTC GCGGGCATTC TCGTGTGCTC GTTTCTCGGC
GGGATGCGCG CGGTCACGTG GACGCAGGTC GCGCAGTACA TCATCCTGAT CAGTGCGATC
CTGATTCCGG TGTCGCTGAT CGCGATGAAG AACGGGCTCG GCCCTGTGCC GCAGTTCAAT
TACGGCAAGC TGATGGGGCG CGTCGCGGCG CGCGAGGCGC AGGTGCGCGA CGCGCACGAC
GAGCAGCAGG TGCGCGATGC ATATCGCCGG CAGGCCGCGG CTATCCAGAC GCGGCTCGAC
CGGCTGCCGG CGTCCTATGC GGATGCGCGT CGACATCTCG TCGACCAGCT TGCCGACCTG
CGCCGTCACA ACGGGCCGCT GCGCGAGATC AGCCAGCGCG AGCGCGAACT GGCCGATTTC
CCGCGCGATC CGGCAGCGGC GCGCGTGGCG TGGACGCAGG CGCGCGACGA CCTGCTCGCG
CGTGCCGAGC CGCCCGTGCC GATGCACGAG CCGTTTCCGG CCGCGAGCGA AGACGAACGC
AAGCCGCGCG AGCGGAATTT CCTCGCGCTG CTGCTGTGCC TGTCGCTCGG CACCGCGAGC
CTCCCGCACA TCCTGACGCG CTACAACACG ACCACGTCGG TCGCGTCGGC GCGGCGCTCG
GTCGGCTGGA CGCTGTTCTT CATCGCGCTG TTCTACCTGA GCGTGCCGGT GCTCGCGGTG
CTGATCAAGT ACGAGATCCT CGCGAATCTC GTCGGGCGGC CGTTCGCCGA ATTACCGGCG
TGGGTCACGC AATGGCATCA CTTCGAACCC GACCTGATCA GTGTCGTCGA GGTGATTCGC
GACGGCATCG TGCACTGGTC GGAAATCCAG ATGCAGCCGG ACATGGTCGT GCTGGCCGCG
CCGGAGATCG CGGGGCTGCC GTACGTGGTG TCGGGGCTGA TCGCAGCCGG CGCGCTGGCC
GCGGCGCTGT CGACCGCGGA CGGGTTGCTG CTGACGATCG CGAACGCGCT GTCGCACGAC
GTCTATTACT GCATGGTCGC GCCCGATGCG TCGAGCCAGC GGCGCGTGAC GATCTCGAAG
GTGCTGCTGC TGGGGGTGGC GCTGTTCGCG TCGTATGTCG CATCGCTCAA TACCGGGAAG
ATCCTGTTTC TCGTCGGCGC CGCGTTTTCG CTGGCGGCGT CGAGCTTCTT TCCGGTGCTG
GTGCTGGGGG TGTTCTGGAA GCGCACGACG ACGCGTGGCG CGATCGCCGG GATGGTGACG
GGGTTGGCGG TGTGTGTGTA CTACATCGTG TCGACTTATC CGTTCTTCAC GCAGTTGACC
GGGTTCGCCG GGCGTACGTG GTTCGGGATC GAGCCGATCA GCTCAGGCGT GTTCGGTGTG
CCGGCGGGGT TCGCGGTGGC GATCGTGGTG AGTCTGTGTG ATAAGCGGCC GGATGAGTAT
ACGCGGGCGT TGGTGGATTA CATTCGGCAT CCGTGA
|
|---|
| Protein sequence | MLTHRLIRAY ALYTLGFLGF VLLMWRIERA TGSGVWIGYV FLFVPIAVYA VIGLLSRTSD
LVEYYVAGRR VPSAFNGMAT AADWLSAASF IGLAGSLYAT GYDALAYVMG WTGGFCLVAF
LLAPYVRKLA RYTIPDFLGT RFSSTAVRAL AAGAAILCSF VYLVAQIQGI GLIATRFIGV
DFAIGIFCGL AGILVCSFLG GMRAVTWTQV AQYIILISAI LIPVSLIAMK NGLGPVPQFN
YGKLMGRVAA REAQVRDAHD EQQVRDAYRR QAAAIQTRLD RLPASYADAR RHLVDQLADL
RRHNGPLREI SQRERELADF PRDPAAARVA WTQARDDLLA RAEPPVPMHE PFPAASEDER
KPRERNFLAL LLCLSLGTAS LPHILTRYNT TTSVASARRS VGWTLFFIAL FYLSVPVLAV
LIKYEILANL VGRPFAELPA WVTQWHHFEP DLISVVEVIR DGIVHWSEIQ MQPDMVVLAA
PEIAGLPYVV SGLIAAGALA AALSTADGLL LTIANALSHD VYYCMVAPDA SSQRRVTISK
VLLLGVALFA SYVASLNTGK ILFLVGAAFS LAASSFFPVL VLGVFWKRTT TRGAIAGMVT
GLAVCVYYIV STYPFFTQLT GFAGRTWFGI EPISSGVFGV PAGFAVAIVV SLCDKRPDEY
TRALVDYIRH P
|
|---|
| |