| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2196 |
|---|
| Symbol | |
|---|
| ID | 6123860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2452341 |
|---|
| End bp | 2453900 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641638778 |
|---|
| Product | deoxyribodipyrimidine photo-lyase |
|---|
| Protein accession | YP_001765479 |
|---|
| Protein GI | 170733532 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCG GCGTCGACAC CGTGCAGCGC AGCCGCGACA ATACGCGTCT CCTTTTGCTT
TCGCCATCGA GGTGCCTGCC CGTGTCTGCC AAGCCGTCCG TTGCTCCCGC GATCGTCTGG
TTCCGCGACG ATCTGCGCGT GACCGATCAG CCCGCGCTGA CGCGCGCGGT CGAATCCGGC
CGGCCACTCG TCTGCGTGTT CGTCGACGAC ACGGGCGCCG GCGCCGGGCC CGCGCTCGGC
GGCGCGGCGC GCTGGTGGCT GCACGGGTCG CTGGCCGGGC TCGACGCCGC GCTCGCGCGT
CACGGCGGGC GCCTGCTGCT GTTGCGCGGC GACGCGCAGC GCGAGATCGA GCGCGTCGTC
GGTGACACGG GGGCAGCAGC CGTGTACTGG AACCGCCGCT ATGCTCAGCA GCAGCGCGAC
GCGGACGCGG CGCTGAAGGC GTCGCTCAAG GCGCGCGGCG TGACGGTCGA GAGCAGCAAC
GGCAGCCTGC TGAACGAGCC GTGGGAGGTG CTGACGGGCA GCGGCGGCCC GTACCAGGTA
TTCACCGCGT ACTGGCGCGC GGCGCGCCGC GATCGCACGG TCGCCGCGCC GTTGCCGGCA
CCCGAGCGGA TCGCGTTTCA TCCGTGGCCG AAAGCCGTGC GCGACCGCGC GCTGGCGCTC
GATGCACTCG CGTTGCGTCC GCATGCGCCG GACTGGGCCG GCGGCCTGCG CGATGCGTGG
CCGGCGCCCG ACGAAGCCGG CGCGCTCGCG CGACTCGACA GGTTTCTGAC GACCTCGCTC
GCCGGCTATG CGGATGCGCG CGACCGCCCC GACCGCCCCG CGACGAGCCG ACTGTCGCCG
TTCCTGCGTT TCGGCAACGT GTCGCCGCGA CAGGTGTGGC ATGCGGTGCA GGGCGCCGCG
AACGCAGGCG GCGCGGCATA CGCGGCGCAC GCCGACAAGT TCCTGAGCGA GCTCGGCTGG
CGCGAATTCA GCTACACGCT GCTGTATCAC TTCCCGGCGC TCGCGACCGA CAATTTCCGT
GCGCAATTCG ATGCAATGCC GTGGCGCGAC GATCCCGCCG CGTTACGTGC GTGGCAGCGT
GGCCGCACCG GCTATCCGCT CGTCGATGCG GGCCTGCGCG AGCTGTGGAC GACCGGCTGG
ATGCACAACC GCGTGCGGAT GGTCGTCGCG TCGTTCCTGA TCAAGCATCT GCTGATCGAC
TGGCGCGCGG GCGAAGCATG GTTCCGCGAC ACGCTGGTCG ATGCCGATCC CGCGAACAAC
GCGGCGAGCT GGCAATGGGT GGCCGGCTGC GGCGCCGACG CCGCGCCGTA TTTCCGCATC
TTCAATCCGG TCGCGCAGGG GCAGAAGTTC GACCCGGGCG GCGCTTACGT GCGGCGCTGG
GTGCCCGAGC TCGCCGGCCT CGACGACGCG TCGATCCATG CGCCGTGGGA GGCGTCGCCG
CTGGCGCTCG AGGCGGCCGG CGTACGGCTC GGCGTCGACT ATCCGGCGCC GCTGGTCGAG
CATGCGGCCG CGCGCGCCCG TGCGCTCGAT GCGCTGGCCG CGTTGCCGAA GCGCCGCTGA
|
|---|
| Protein sequence | MTAGVDTVQR SRDNTRLLLL SPSRCLPVSA KPSVAPAIVW FRDDLRVTDQ PALTRAVESG
RPLVCVFVDD TGAGAGPALG GAARWWLHGS LAGLDAALAR HGGRLLLLRG DAQREIERVV
GDTGAAAVYW NRRYAQQQRD ADAALKASLK ARGVTVESSN GSLLNEPWEV LTGSGGPYQV
FTAYWRAARR DRTVAAPLPA PERIAFHPWP KAVRDRALAL DALALRPHAP DWAGGLRDAW
PAPDEAGALA RLDRFLTTSL AGYADARDRP DRPATSRLSP FLRFGNVSPR QVWHAVQGAA
NAGGAAYAAH ADKFLSELGW REFSYTLLYH FPALATDNFR AQFDAMPWRD DPAALRAWQR
GRTGYPLVDA GLRELWTTGW MHNRVRMVVA SFLIKHLLID WRAGEAWFRD TLVDADPANN
AASWQWVAGC GADAAPYFRI FNPVAQGQKF DPGGAYVRRW VPELAGLDDA SIHAPWEASP
LALEAAGVRL GVDYPAPLVE HAAARARALD ALAALPKRR
|
|---|
| |