Gene Bcenmc03_2189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2189 
Symbol 
ID6123853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2445034 
End bp2446557 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content69% 
IMG OID641638771 
Producthistidine ammonia-lyase 
Protein accessionYP_001765472 
Protein GI170733525 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0881955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACGT TGACCCCCGG CCACCTGACC CTTCCGCAAC TGCGCCGGAT CGCCCGCGAA 
CCCGTGCAAC TGAAGCTCGA CCCGGCCAGC TTCGCGAAGA TCGACGCGGG CGCGAAGGCC
GTCGCCGACA TCGCCGCGAA GGGTGAGCCG GCCTACGGCA TCAACACGGG TTTCGGCCGT
CTGGCCAGCA CCCACATCCC GCACGACCAG CTCGAACTGC TGCAGAAGAA CCTCGTGCTG
TCGCACGCGG TCGGCGTGGG CGAGCCGATG GCGCGTTCGT CGGTGCGCCT GCTGATGGCG
CTGAAGCTGT CGAGCCTCGG CCGCGGCCAC TCGGGCATCC GCCGTGAAGT GATGGATGCG
CTGATCACGC TGTTCAACGC CGACGTGCTG CCGCTGATCC CGGTGAAGGG TTCGGTCGGC
GCATCGGGCG ACCTCGCACC GCTCGCGCAC ATGTCGGCCG TGCTGCTCGG CGTCGGCGAA
GTGTTCATCC GCGGCGAGCG CGCGAGTGCG CTCGACGGTC TGCGCGTCGC GGGCCTCGCG
CCGCTGACGC TGCAGGCGAA GGAAGGCCTC GCGCTCCTGA ACGGCACGCA GGCGTCGACC
GCGCTGGCGC TCGACAACAT GTTCGCGATC GAGGACCTGT ACCGCACCGC GCTCGTCGCC
GGCGCGCTGT CGGTCGACGC GGCAGCCGGT TCGGTGAAGC CGTTCGACGC GCGCATCCAC
GAACTGCGCG GCCATCAAGG CCAGATCGAC GCGGCCGCGT CGTACCGCGA ACTGCTCGAA
GGCTCGCCGA TCAACCAGTC GCACCGCGAC TGCGACAAGG TGCAGGACCC GTACAGCCTG
CGCTGCCAGC CGCAGGTGAT GGGCGCGTGC CTGGACCAGA TGCGCCATGC GGCCGACGTG
CTGCTGGTCG AAGCGAACGC CGTGTCGGAC AATCCGCTGA TCTTCCCGGA CACCGGCGAA
GTGCTGTCGG GCGGCAACTT CCACGCCGAA CCCGTCGCGT TCGCGGCCGA CAACCTCGCG
CTCGCCGCGG CGGAAATCGG CGCGCTGGCC GAGCGCCGCA TCGCGCTGCT GATCGACGCG
ACGCTGTCGG GCCTGCCTCC GTTCCTCGTG AAGGACGGCG GCGTGAACTC CGGCTTCATG
ATCGCGCACG TGACGGCCGC CGCGCTGGCA TCGGAAAACA AGACGCTCGC GCACCCGGCA
TCGGTCGACT CGCTGCCGAC CTCGGCCAAC CAGGAAGACC ACGTGTCGAT GGCGACGTTC
GCCGCGCGCA AGCTCGCCGA CATCGCGGAC AACACGAAGC ACATCCTCGC GATCGAACTG
CTGGCCGCCG CGCAAGGCGT CGACCTGCGC GCGCCGTACC ACACGAGCCC GAAGCTCGCG
CCGGTGATGG AGACGATCCG CGGCAAGGTC GCGCACTACG AACTCGACCA CTACTTCGCA
CCGGACATCG CGGTGATCGC GAAGCTGGTC GGCGAGCGCG CGTTCGCGAA GGTCGCGCCG
TTCTCGTTCG CGTCGGAACA GTAA
 
Protein sequence
MITLTPGHLT LPQLRRIARE PVQLKLDPAS FAKIDAGAKA VADIAAKGEP AYGINTGFGR 
LASTHIPHDQ LELLQKNLVL SHAVGVGEPM ARSSVRLLMA LKLSSLGRGH SGIRREVMDA
LITLFNADVL PLIPVKGSVG ASGDLAPLAH MSAVLLGVGE VFIRGERASA LDGLRVAGLA
PLTLQAKEGL ALLNGTQAST ALALDNMFAI EDLYRTALVA GALSVDAAAG SVKPFDARIH
ELRGHQGQID AAASYRELLE GSPINQSHRD CDKVQDPYSL RCQPQVMGAC LDQMRHAADV
LLVEANAVSD NPLIFPDTGE VLSGGNFHAE PVAFAADNLA LAAAEIGALA ERRIALLIDA
TLSGLPPFLV KDGGVNSGFM IAHVTAAALA SENKTLAHPA SVDSLPTSAN QEDHVSMATF
AARKLADIAD NTKHILAIEL LAAAQGVDLR APYHTSPKLA PVMETIRGKV AHYELDHYFA
PDIAVIAKLV GERAFAKVAP FSFASEQ