Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2189 |
Symbol | |
ID | 6123853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2445034 |
End bp | 2446557 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641638771 |
Product | histidine ammonia-lyase |
Protein accession | YP_001765472 |
Protein GI | 170733525 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0881955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACGT TGACCCCCGG CCACCTGACC CTTCCGCAAC TGCGCCGGAT CGCCCGCGAA CCCGTGCAAC TGAAGCTCGA CCCGGCCAGC TTCGCGAAGA TCGACGCGGG CGCGAAGGCC GTCGCCGACA TCGCCGCGAA GGGTGAGCCG GCCTACGGCA TCAACACGGG TTTCGGCCGT CTGGCCAGCA CCCACATCCC GCACGACCAG CTCGAACTGC TGCAGAAGAA CCTCGTGCTG TCGCACGCGG TCGGCGTGGG CGAGCCGATG GCGCGTTCGT CGGTGCGCCT GCTGATGGCG CTGAAGCTGT CGAGCCTCGG CCGCGGCCAC TCGGGCATCC GCCGTGAAGT GATGGATGCG CTGATCACGC TGTTCAACGC CGACGTGCTG CCGCTGATCC CGGTGAAGGG TTCGGTCGGC GCATCGGGCG ACCTCGCACC GCTCGCGCAC ATGTCGGCCG TGCTGCTCGG CGTCGGCGAA GTGTTCATCC GCGGCGAGCG CGCGAGTGCG CTCGACGGTC TGCGCGTCGC GGGCCTCGCG CCGCTGACGC TGCAGGCGAA GGAAGGCCTC GCGCTCCTGA ACGGCACGCA GGCGTCGACC GCGCTGGCGC TCGACAACAT GTTCGCGATC GAGGACCTGT ACCGCACCGC GCTCGTCGCC GGCGCGCTGT CGGTCGACGC GGCAGCCGGT TCGGTGAAGC CGTTCGACGC GCGCATCCAC GAACTGCGCG GCCATCAAGG CCAGATCGAC GCGGCCGCGT CGTACCGCGA ACTGCTCGAA GGCTCGCCGA TCAACCAGTC GCACCGCGAC TGCGACAAGG TGCAGGACCC GTACAGCCTG CGCTGCCAGC CGCAGGTGAT GGGCGCGTGC CTGGACCAGA TGCGCCATGC GGCCGACGTG CTGCTGGTCG AAGCGAACGC CGTGTCGGAC AATCCGCTGA TCTTCCCGGA CACCGGCGAA GTGCTGTCGG GCGGCAACTT CCACGCCGAA CCCGTCGCGT TCGCGGCCGA CAACCTCGCG CTCGCCGCGG CGGAAATCGG CGCGCTGGCC GAGCGCCGCA TCGCGCTGCT GATCGACGCG ACGCTGTCGG GCCTGCCTCC GTTCCTCGTG AAGGACGGCG GCGTGAACTC CGGCTTCATG ATCGCGCACG TGACGGCCGC CGCGCTGGCA TCGGAAAACA AGACGCTCGC GCACCCGGCA TCGGTCGACT CGCTGCCGAC CTCGGCCAAC CAGGAAGACC ACGTGTCGAT GGCGACGTTC GCCGCGCGCA AGCTCGCCGA CATCGCGGAC AACACGAAGC ACATCCTCGC GATCGAACTG CTGGCCGCCG CGCAAGGCGT CGACCTGCGC GCGCCGTACC ACACGAGCCC GAAGCTCGCG CCGGTGATGG AGACGATCCG CGGCAAGGTC GCGCACTACG AACTCGACCA CTACTTCGCA CCGGACATCG CGGTGATCGC GAAGCTGGTC GGCGAGCGCG CGTTCGCGAA GGTCGCGCCG TTCTCGTTCG CGTCGGAACA GTAA
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Protein sequence | MITLTPGHLT LPQLRRIARE PVQLKLDPAS FAKIDAGAKA VADIAAKGEP AYGINTGFGR LASTHIPHDQ LELLQKNLVL SHAVGVGEPM ARSSVRLLMA LKLSSLGRGH SGIRREVMDA LITLFNADVL PLIPVKGSVG ASGDLAPLAH MSAVLLGVGE VFIRGERASA LDGLRVAGLA PLTLQAKEGL ALLNGTQAST ALALDNMFAI EDLYRTALVA GALSVDAAAG SVKPFDARIH ELRGHQGQID AAASYRELLE GSPINQSHRD CDKVQDPYSL RCQPQVMGAC LDQMRHAADV LLVEANAVSD NPLIFPDTGE VLSGGNFHAE PVAFAADNLA LAAAEIGALA ERRIALLIDA TLSGLPPFLV KDGGVNSGFM IAHVTAAALA SENKTLAHPA SVDSLPTSAN QEDHVSMATF AARKLADIAD NTKHILAIEL LAAAQGVDLR APYHTSPKLA PVMETIRGKV AHYELDHYFA PDIAVIAKLV GERAFAKVAP FSFASEQ
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