Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2154 |
Symbol | |
ID | 6123818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2394934 |
End bp | 2396583 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641638734 |
Product | dihydrolipoamide acetyltransferase |
Protein accession | YP_001765437 |
Protein GI | 170733490 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [COG0511] Biotin carboxyl carrier protein |
TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.272445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.611025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCAAG CGATCGAAGT GAAGGTGCCG GATATCGGCG ATTACAAGGA CGTGCCGGTC ATCGAGATCG GCGTGAAGGT GGGCGATACG GTCGAGCCCG AGCAGTCGCT CGTCACGCTC GAGTCGGACA AGGCGACGAT GGACGTGCCG AGCCCGGTCG GCGGCGTCGT GAAGGAAATC AAGGTCAAGG TCGGCGATTC CGTGTCGGAA GGCTCGCTGA TCATCCTGCT CGAAGGCGGC GCAGGCGCCC AGGCGAACGG CGCGGCCGCG CCGGCCGCGG CTCCGGCTCC GGCAGCAGCA CCGGCACCGG CACCCGCAGC CCCCGCTGCC GCACCGGCAG CGTCCGGCGG CACGCTGGAA GTGAAGGTGC CCGACATCGG CGACTACAAG GACGTCCCGG TGATCGAGAT CGGTGTGAAA GTCGGCGACA CGGTCGAGAA GGAGCAGTCG CTCGTCACGC TCGAGTCGGA CAAGGCGACG ATGGACGTGC CGAGCCCGGC CGCCGGTGTC GTGAAGGACA TCAAGGTCAA GGTGGGCGAT TCGGTGTCGG AAGGCACGCT GATCGTGCTG CTCGAAGCCG CCGGCGCACC GGCTGCCGCA CCGCAGGCCA GCGCACCGGC TCCGGCCGCT GCCGCACCGG CGCCTGCTGC TGCACCGGCA CCCGCGCCTG CGAAGGCTGC GCCGGCACCG GCTGCTGCTG CCCCGGCCGC CGCGCCGTCG GGCGAATACC GCGCCAGCCA CGCATCGCCG TCGGTCCGCA AGTTCGCACG CGAACTCGGC GTCGACGTCG CGCGTGTGCA GGGTTCGGGT CCGAAGGGCC GCATTACGAA GGAAGACGTC ACGGGCTTCG TGAAGGGCGT GATGACCGGC CAGCGCGCGG CACCGGCCGC GGCAGCCGCA CCGGCAGGCG GCGGCGAGTT GAACCTGCTG CCGTGGCCGA AGGTCGATTT CTCGAAGTTC GGCCCGTTCG AGGCGAAGCC GCTGTCTCGC ATCAAGAAGA TCTCGGGCGC GAACCTGCAT CGCAACTGGG TGATGATCCC GCACGTCACG AACAACGACG AAGCGGACAT CACCGAGCTC GAAGCGCTGC GCGTCCAGCT GAACAAGGAG CACGAAAAGG CGGGCGTGAA GTTCACGATG CTCGCGTTCG TGATCAAGGC GGTCGTCGCC GCGCTGAAGA AATTCCCGAC CTTCAACGCG AGCCTCGACG GCGACAACCT CGTGTTCAAG CAGTACTTCC ACGTCGGTTT CGCGGCCGAT ACGCCGAACG GCCTCGTCGT GCCGGTGATC CGCGATGCGG ACAAGAAGGG CCTCGTCGAC ATCGCGAAGG AAATGAGCGA CCTGTCGAAG GCCGCGCGCG AAGGCAAGCT GAAGCCGGAT CAGATGCAGG GCGGCTGCTT CTCGATCTCG TCGCTCGGCG GGATCGGCGG GACGAACTTC ACGCCGATCA TCAACGCACC GGAAGTGGCG ATCCTCGGGT TGTCGCGCGG CCAGATGAAG CCGGTGTGGG ACGGCAAGCA GTTCGTGCCG CGGCTCATGC TGCCGCTGTC GCTGTCGTAT GACCATCGCG TCATCGATGG CGCGGAAGCC GCGCGGTTCA ATGCGTATCT CGGAGCGTTG CTCGGGGATT TCCGGCGCAT CATTCTTTGA
|
Protein sequence | MSQAIEVKVP DIGDYKDVPV IEIGVKVGDT VEPEQSLVTL ESDKATMDVP SPVGGVVKEI KVKVGDSVSE GSLIILLEGG AGAQANGAAA PAAAPAPAAA PAPAPAAPAA APAASGGTLE VKVPDIGDYK DVPVIEIGVK VGDTVEKEQS LVTLESDKAT MDVPSPAAGV VKDIKVKVGD SVSEGTLIVL LEAAGAPAAA PQASAPAPAA AAPAPAAAPA PAPAKAAPAP AAAAPAAAPS GEYRASHASP SVRKFARELG VDVARVQGSG PKGRITKEDV TGFVKGVMTG QRAAPAAAAA PAGGGELNLL PWPKVDFSKF GPFEAKPLSR IKKISGANLH RNWVMIPHVT NNDEADITEL EALRVQLNKE HEKAGVKFTM LAFVIKAVVA ALKKFPTFNA SLDGDNLVFK QYFHVGFAAD TPNGLVVPVI RDADKKGLVD IAKEMSDLSK AAREGKLKPD QMQGGCFSIS SLGGIGGTNF TPIINAPEVA ILGLSRGQMK PVWDGKQFVP RLMLPLSLSY DHRVIDGAEA ARFNAYLGAL LGDFRRIIL
|
| |