Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2153 |
Symbol | |
ID | 6123817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2392878 |
End bp | 2394650 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641638733 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001765436 |
Protein GI | 170733489 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0291933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTCA TCGAAGTCAA GGTTCCGGAT ATCGGCGATT TCAGCGGCGT CGATGTCATC GAAGTCAACG TCAAACCCGG CGACGTGATC GAAAAAGAGC AAACGCTCAT CACGCTCGAA TCCGACAAAG CCTCCATGGA AGTGCCCAGC GACGTCGCCG GCACCGTCAA GGAAGTCAAG GTCAAAGCCG GCGAGAAAGT CTCGCAAGGC ACCGTCATCG CCATCGTCGA AGCGTCGGCA GGCGCAGCCG CGCCCGCACC CGCGAAAGCA CCCGAGGCGC CGAAGCCCGC AGCCGCCGCA CCGGCTCCGG CCGCCGCCGC GCCGGCGCCC GCGCCGCAAG CGGGCAGCTA CAGCGGCGCC GCCGACATCG AGTGCGACAT GCTCGTGCTC GGCGCCGGCC CCGGCGGCTA CTCGGCCGCG TTCCGCGCCG CCGACCTCGG CATGAAGACC GTACTCGTCG AACGCTATTC GACGCTCGGC GGCGTCTGCC TGAACGTCGG TTGCATCCCG TCGAAGGCGC TGCTGCATAC GTCGCTCGTC GTCGAGGAAG CCGCGGCGCT CGCGTCGCAC GGCATCACGT TCGGCAAGCC GGAAGTCGAT CTCGACAAGC TGCGCGACTT CAAGGGCGGC GTCGTCAAGA AACTGACGAC GGGTCTCGCC GGCATGGCGA AGGCGCGCAA GGTCGAAGTG GTCACCGGCG TCGGCGCGTT CGTCGATCCG TTCCACATGG AAGTGCAGGG CGAAAACGGC AAGAAGGTCG TCAAGTTCAA GCAGGCGATC ATCGCCGCCG GCTCGCAGGC CGTGAAGCTG CCGTTCATGC CGGAAGACCC GCGCGTCGTC GATTCGACGG GCGCGCTCGA ACTGCGCCAG TTGCCCAAGC GCATGCTCGT GATCGGCGGC GGCATCATCG GCCTCGAAAT GGCCACGGTG TACTCGACGC TCGGCGCCGA GATCGACGTC GTCGAAATGA TGGACGGCCT GATGATGGGC GCCGACCGCG ATCTCGTGAA GGTCTGGGAA AAGTACAACG CGAAGCGCTT CGGCAACGTG ATGCTGAAGA CCAAGACGGT CGGCGCGGAA GCGAAGGAAG ACGGCATCTA CGTGAAGTTC GAGGGCGAGA AGGCGCCGGC GGAAGCGCAG CGCTACGACC TCGTGCTCGT CGCGGTGGGC CGCAGCCCGA ACGGCAAGAA GATCGGTGCC GACAAGGCCG GCGTCGCGGT CACGGATCGC GGCTTCATCG ACGTCGACAA GCAGATGCGC ACGAACGTGC CGCACATCTT CGCGATCGGC GATATCGTCG GCCAGCCGAT GCTCGCGCAC AAGGCCGTGC ATGAAGGCCA CGTCGCAGCG GAAGCCGCGC ATGGCGAGAA GGCGTACTTC GACGCGCTGC AGATCCCGTC GGTGGCCTAC ACCGATCCGG AAGTGGCGTG GGCCGGCAAG ACCGAAGACC AGTGCAAGGC CGAAGGCATC AAGTACGGCA AGGCCGTGTT CCCGTGGGCC GCTTCGGGCC GCGCGATCGC GAACGGCCGC GACGAAGGCT TTACGAAGCT GATCTTCGAC GAGGAAACCC ATCGCGTGAT CGGCGGCGCG ATCGTCGGCC TGAACGCGGG CGACCTGATC AGCGAAGTGT GCCTCGCGGT CGAGATGGGC GCGGACGCGG AAGACATCGG CAAGACGATC CATCCGCACC CGACGCTCGG CGAATCGGTC GGCATGGCCG CCGAGCTGTA CGAAGGCGTC TGCACGGACC TGCCGCCGCA GCGCAAGAAG TAA
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Protein sequence | MSLIEVKVPD IGDFSGVDVI EVNVKPGDVI EKEQTLITLE SDKASMEVPS DVAGTVKEVK VKAGEKVSQG TVIAIVEASA GAAAPAPAKA PEAPKPAAAA PAPAAAAPAP APQAGSYSGA ADIECDMLVL GAGPGGYSAA FRAADLGMKT VLVERYSTLG GVCLNVGCIP SKALLHTSLV VEEAAALASH GITFGKPEVD LDKLRDFKGG VVKKLTTGLA GMAKARKVEV VTGVGAFVDP FHMEVQGENG KKVVKFKQAI IAAGSQAVKL PFMPEDPRVV DSTGALELRQ LPKRMLVIGG GIIGLEMATV YSTLGAEIDV VEMMDGLMMG ADRDLVKVWE KYNAKRFGNV MLKTKTVGAE AKEDGIYVKF EGEKAPAEAQ RYDLVLVAVG RSPNGKKIGA DKAGVAVTDR GFIDVDKQMR TNVPHIFAIG DIVGQPMLAH KAVHEGHVAA EAAHGEKAYF DALQIPSVAY TDPEVAWAGK TEDQCKAEGI KYGKAVFPWA ASGRAIANGR DEGFTKLIFD EETHRVIGGA IVGLNAGDLI SEVCLAVEMG ADAEDIGKTI HPHPTLGESV GMAAELYEGV CTDLPPQRKK
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