| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2091 |
|---|
| Symbol | |
|---|
| ID | 6123755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2324766 |
|---|
| End bp | 2326295 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641638670 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| Protein accession | YP_001765374 |
|---|
| Protein GI | 170733427 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.242207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGATT TCCCCTTCCT GAGCCTGGCC ATCTGGGTTC CGATACTGTT CGGCGCGGTG
CTGCTGCGCG CCGGTTCCGA CCAGCATTCA CACCGGATAC GACTGATCGC GCTGGTCGGC
GCGATCGCCG GGCTGGCGGC CGTCGTGCCG CTGATCGCCG GTTTCGACGC GCATTCGGCG
GCGATGCAGT TCGTCGAAAG ACGCGACTGG CTGGCGGCAT TCAATGCCGG CTGGCGGGTC
GGCATCGACG GCGCGTCGCT GTGGCTCGTC GTGCTGACCG CATTCACGAC GCTCGTGGTG
GTGGTGGCGT CGTGGGAGTC GGTCACGGTG CGCGTCGCGC AGTACTACGC GTCGTTCCTG
ATCCTGTCGG GGCTGATGGT CGGCGTATTC GTCGCGCAGG ACGGGCTGCT GTTCTTCATC
TTCTTCGAGG CGACGCTGAT CCCGCTGTAC CTGCTGATCG GTACGTGGGG GCGCGAGCGA
CGCGTGTATG CGGCCGTGAA GTTCTTCTTC ATCTCGTTCG CCGGCTCGCT GTTGCTGCTG
ATGGCGATGC TGTACCTGTA CGCGCAGTCG CATACGTTCG ACATGGCCGT GTGGCGCACG
CTGCAGCTCG GCTTCGCGCC GCAGTTGCTG GTGTTCCTCG GCTTTTTCGC GGCGTTCGCG
GTCAAGGTGC CGATGTGGCC GGTCCACACG TGGCTGAGCG ACGTGTACAC GGACGGCCCG
ACGGGCGCCG CGCTGATGCT CGCGATGCTC AAGCTCGGTG GTTACGGGTT CCTGCGCTTC
GCGCTGCCGA TCACGCCGGA CGCGAGCCAC TTCTTCGCGC CGGCCGTGAT CGCGCTGTCG
CTGTTCGCGA TCGTCTACGC GAGCCTGATC GCGCTCGCGC AGACCGATCT CGGCAAGCTG
CTCGCGTATT CGACGGTCGC GCACATGGGG ATCGTCACGC TGGGGCTGTT CCTGTTCAAC
CGGATCGGCG TCGAAGGCGC GATCGTGCAA CTCGTGTCGT ACGGCTTCGT GGCGGGCGCG
ATGCTGTTGT GCGTGAACGT GCTCGTGGAT CGCACCAGGC AGCGCGAGAT TGCAGCGTAC
GGCGGCGTGG CGGGCGTGAT GCCGCGTTTC GCGACCTTCA CGCTGCTGTT CGCGATGGCC
AACGTCGGTC TGCCGGGCAC GTCGGGGTTC GTCGGCGAGT TCATGGTGAT CATGGGCGCG
ATCCGCTTCA ACTTCTGGAT CGGTGCGATC GCGGCGCTCA CGCTGATCCT CAGCGCGTCG
TACACGCTGT GGATGCTCAA GCGCGTCGTG TTCGGCAAGG TCGCGAGCCA GCGGATCGCG
AAGCTCGCCG ACCTGAATCG TCGCGAGATC GTGATGTTCG CGTCGCTCGC GCTGATCGTG
CTGGCGGTCG GCATCGATCC GAAGCCGTTC ACCGATGCAA TCGATCCGAC CGTCGGCAAG
CTGATCCAGG AAGCGAGCCA TTCGAAGGTG CCAGCAGGGG ATGGCCCCGC GCCGGCGCTG
CCGTCGTACA TGGCGTCGAC GCACGACTGA
|
|---|
| Protein sequence | MHDFPFLSLA IWVPILFGAV LLRAGSDQHS HRIRLIALVG AIAGLAAVVP LIAGFDAHSA
AMQFVERRDW LAAFNAGWRV GIDGASLWLV VLTAFTTLVV VVASWESVTV RVAQYYASFL
ILSGLMVGVF VAQDGLLFFI FFEATLIPLY LLIGTWGRER RVYAAVKFFF ISFAGSLLLL
MAMLYLYAQS HTFDMAVWRT LQLGFAPQLL VFLGFFAAFA VKVPMWPVHT WLSDVYTDGP
TGAALMLAML KLGGYGFLRF ALPITPDASH FFAPAVIALS LFAIVYASLI ALAQTDLGKL
LAYSTVAHMG IVTLGLFLFN RIGVEGAIVQ LVSYGFVAGA MLLCVNVLVD RTRQREIAAY
GGVAGVMPRF ATFTLLFAMA NVGLPGTSGF VGEFMVIMGA IRFNFWIGAI AALTLILSAS
YTLWMLKRVV FGKVASQRIA KLADLNRREI VMFASLALIV LAVGIDPKPF TDAIDPTVGK
LIQEASHSKV PAGDGPAPAL PSYMASTHD
|
|---|
| |