Gene Bcenmc03_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2077 
Symbol 
ID6123741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2310003 
End bp2310674 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content65% 
IMG OID641638656 
ProductNLP/P60 protein 
Protein accessionYP_001765360 
Protein GI170733413 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.010952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.957052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCATC GATCCCTGAC CCAGGCATGC GCGCGCACCA TCGCCGGGCT GTTCATCGGC 
GCCCTGTTCG CAGCAGCACC CGGCGCGTTC GCCGACGAAG TCAGCAGTTT TAACCAGAAT
GTCACCAATT CGACTCAGAT CGGGTCGGGT TCCTCCCTCC AGCAGACCAA CGCGCAGCCG
TCGAGCGGCG GCGCGAAGTC GTTCCTTGCC GGCATGGCGG GCAAGGCGGG CGACGTGGTC
GTCGGCGCGC TGAACATGAT CGGCGTGCGG TATCGCTGGG GCGGCAACTC GCCGGATTCG
GGCCTCGACT GCAGCGGCTT CGTGCGCTAC GTGTTCCAGG ACACGCTCGG CATGTCGCTG
CCGCGTCGCG CGGAAGAAAT GAGCCGCGTC GGCGAGAAGG TGAGCATGAG CAACCTGAAG
CCGGGCGATC TCGTGTTCTT CAACACGATG CGCCGCACGT TCTCGCACGT CGGCATCTAT
ATCGGCGACA ACAAGTTCGT GCACTCGCCG TCGACGGGCA GCACCGTCCG CGTCGACGAT
CTCGACAGCG GCTACTGGGA AAAGCGTTTC ACCGGCGCGC GCCGGATCGA ATCGGAATTC
CCGATGAAGC CCGAAGACCT GCGCCGCGTA CGCGCGACGA TCGGCGACGA TTCGGCGAAC
GGCAGCAACT GA
 
Protein sequence
MQHRSLTQAC ARTIAGLFIG ALFAAAPGAF ADEVSSFNQN VTNSTQIGSG SSLQQTNAQP 
SSGGAKSFLA GMAGKAGDVV VGALNMIGVR YRWGGNSPDS GLDCSGFVRY VFQDTLGMSL
PRRAEEMSRV GEKVSMSNLK PGDLVFFNTM RRTFSHVGIY IGDNKFVHSP STGSTVRVDD
LDSGYWEKRF TGARRIESEF PMKPEDLRRV RATIGDDSAN GSN