| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2051 |
|---|
| Symbol | |
|---|
| ID | 6123715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 2280260 |
|---|
| End bp | 2281399 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641638623 |
|---|
| Product | succinyl-diaminopimelate desuccinylase |
|---|
| Protein accession | YP_001765334 |
|---|
| Protein GI | 170733387 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCA CCCTAGCCCT TACCGAACAG CTGATCGCCC GCGCGTCCGT GACGCCCGAC
GACCAGCACT GCCAGCAGAT CATGACCGAG CGCCTCGCCG CGCTCGGCTT CGAATGCGAG
ACCATCGCGT CGCACGGCGT GACCAACCTG TGGGCCGTCA AGCGCGGCAC CGACGGCCGC
GACGGCAAGC TGCTCGCGTT CGCGGGCCAC ACCGACGTCG TGCCGACCGG CCCGCTCGAA
CAGTGGACCT CGCCGCCGTT CATCCCCGCC CATCGCGACG GCAAGCTGTA CGGCCGCGGC
GCGGCCGACA TGAAGACGTC GCTCGCGGCG TTCGTCGTCG CGTCCGAGGA ATTCGTCGCG
GTGCATCCGG ACCACCGCGG CACGATCGCG TTCCTGATCA CGAGCGACGA GGAAGGCCCG
GCCACCGACG GCACCGTGAA GGTCGTCGAG CTGCTGCAGG CACGCGGCGA GCGGCTCGAC
TACTGCATCG TCGGCGAACC GACGTCGACG GCCGAGCTCG GCGACGTCGT CAAGAACGGC
CGCCGCGGGT CGATGTCCGG CGAACTGGTC GTCAAGGGCG TGCAAGGCCA CATTGCCTAT
CCGCACCTCG CGAAGAACCC GATCCACCTG CTCGCGCCGG CGCTCGCCGA GCTCGCCGCC
GAGCAATGGG ACGCCGGCAA CGAATACTTC CCGCCGACCA CCTGGCAGGT GTCGAACCTG
CACGCCGGCA CCGGCGCGAC CAACGTGACC CCCGGCCACG CCGACCTGCT GTTCAACTTC
CGCTTCTCGA CCGCGAGCAC CGTCGAAGGC CTGCAGGCCC GCGTGCACGC GATCCTCGAC
AAGCACGGCC TCGAATACAC GCTGAAGTGG TCGGTGAGCG GCCTGCCGTT CCTCACGCCG
CGCGGCGAAC TGTCGGGCGC GCTGGAACAC GCGATCCGCA CCGAGACCGG CATCACGACC
GAGCTGTCGA CGACGGGCGG CACGTCGGAC GGCCGCTTCA TCGCGCGCAT CTGCCCGCAG
GTGATCGAGT TCGGCCCGCC GAACGGTAGC ATCCACAAGA TCGACGAGCA CATCGAGGTG
CGCTTCGTCG ACCCGCTGAA GAACGTGTAC CGACGCGTGC TCGAACAACT GATCGCCTGA
|
|---|
| Protein sequence | MSATLALTEQ LIARASVTPD DQHCQQIMTE RLAALGFECE TIASHGVTNL WAVKRGTDGR
DGKLLAFAGH TDVVPTGPLE QWTSPPFIPA HRDGKLYGRG AADMKTSLAA FVVASEEFVA
VHPDHRGTIA FLITSDEEGP ATDGTVKVVE LLQARGERLD YCIVGEPTST AELGDVVKNG
RRGSMSGELV VKGVQGHIAY PHLAKNPIHL LAPALAELAA EQWDAGNEYF PPTTWQVSNL
HAGTGATNVT PGHADLLFNF RFSTASTVEG LQARVHAILD KHGLEYTLKW SVSGLPFLTP
RGELSGALEH AIRTETGITT ELSTTGGTSD GRFIARICPQ VIEFGPPNGS IHKIDEHIEV
RFVDPLKNVY RRVLEQLIA
|
|---|
| |