| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2048 |
|---|
| Symbol | |
|---|
| ID | 6123712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 2277689 |
|---|
| End bp | 2278921 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641638620 |
|---|
| Product | succinyldiaminopimelate transaminase |
|---|
| Protein accession | YP_001765331 |
|---|
| Protein GI | 170733384 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCTT CGCCCGTGAA CCCTCGACTC GACTCGCTCC AGCCCTATCC CTTCGAAAAG
CTGCGCGCCC TGTTCAAGGA CGTGACGCCT TCCGGCGACC TCAAACCGAT CAGCTTCGGC
ATCGGCGAGC CCAAACACGC GACGCCGGCG CTGATCCGCG ACGCCGTGGT GGCCGCGCTC
GACGGGCTCG CGTCGTACCC GGCCACGGCC GGCTCGGACG CGCTGCGCAC GTCGATCGCG
CACTGGCTCG AGCGCCGCTA CGGGCTGCCG GCGATCGATC CGGCCACGCA GGTGCTGCCG
GTGTCGGGCT CGCGCGAAGC GCTGTTCTCG CTCGCGCAGA CGGTGATCGA TGCACGGCCG
TCCGCGGACG GCAAGAAGGC GATCGTACTC TGTCCGAATC CTTTCTATCA AATTTACGAA
GGCGCGGCAC TGCTCGCCGG TGCCGAACCC TATTTCGCGA ACAGCGACCC GGCCCGCAAT
TTCGCGTGCG ACTACGCGGC CGTGCCCGAC GACGTGTGGG CGCGCACGCA ATTGCTGTAC
GTGTGCTCGC CCGGCAACCC GACGGGCGCC GTGCTGACGC TCGACGACTG GCGCGAGCTG
TTCGCGCTGT CGGACCGCCA TGGTTTCGTG ATCGCGTCCG ACGAGTGCTA TTCCGAGATC
TATTTCGACG AAGCGGCGCC GCCGCTCGGC GGCCTCGAGG CCGCGCACCG CCTCGGCCGC
GGCTTCGAGC GGCTCGTGAT GCTGTCGAGC CTGTCGAAGC GCTCGAACGT GCCGGGCATG
CGCTCGGGCT TCGTCGCCGG CGACGCCGCG CTGCTCAAGA AATTCCTGCT GTACCGCACG
TACCACGGCG CCGCGCTGTC GCCGGTCTGG CAGCACGCGA GCATCGCCGC ATGGAACGAC
GAGGCGCACG TGCGCGAGAA CCGCGCGCTG TACCTGCAGA AGTTCAATAC GGTCACGCCG
ATGCTCGCCG ACGTGATCGA CGTGAAGCTG CCCGACGCCG CGTTCTACCT GTGGGCCAAC
GTGTCGCGCA CCGGCCTGTC GGACACCGAG TTCGCCCGCC GCCTGTACGC CGACTATAAT
GTGACGGTTC TGCCCGGCTC GTACCTGGCG CGCGATGCGC ACGGCACGAA CCCGGGCCGC
GATTTCATCC GGATCGCGCT CGTCGCGGGC ACCCCCGAAT GCGTCGAGGG CGCGCAACGC
ATCGTCGATT TCTGCCGCGC TCTCGCGCGG TAA
|
|---|
| Protein sequence | MAASPVNPRL DSLQPYPFEK LRALFKDVTP SGDLKPISFG IGEPKHATPA LIRDAVVAAL
DGLASYPATA GSDALRTSIA HWLERRYGLP AIDPATQVLP VSGSREALFS LAQTVIDARP
SADGKKAIVL CPNPFYQIYE GAALLAGAEP YFANSDPARN FACDYAAVPD DVWARTQLLY
VCSPGNPTGA VLTLDDWREL FALSDRHGFV IASDECYSEI YFDEAAPPLG GLEAAHRLGR
GFERLVMLSS LSKRSNVPGM RSGFVAGDAA LLKKFLLYRT YHGAALSPVW QHASIAAWND
EAHVRENRAL YLQKFNTVTP MLADVIDVKL PDAAFYLWAN VSRTGLSDTE FARRLYADYN
VTVLPGSYLA RDAHGTNPGR DFIRIALVAG TPECVEGAQR IVDFCRALAR
|
|---|
| |