| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1996 |
|---|
| Symbol | |
|---|
| ID | 6123660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 2219498 |
|---|
| End bp | 2221237 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641638568 |
|---|
| Product | putative oxidoreductase |
|---|
| Protein accession | YP_001765279 |
|---|
| Protein GI | 170733332 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTC ATGTGCATGA ATACGACGTC GTCGTGGTCG GCGGCGGCAC GGCCGGCCCG
ATGGCGGCCA TCAAGGCGAA GGAGCGCGAT CCGTCGCTGC GCGTGCTGCT GCTCGAGAAG
GCCAACGTGA AACGCAGCGG CGCGATCTCG ATGGGGATGG ACGGCCTGAA CAACGCGGTG
ATCCCCGGTC ATGCGACGCC CGAGCAATAC ACGCGCGAGA TCACGATCGC CAACGACGGG
ATCGTCGACC AGGAAGCCGT GTACGCGTAT GCGACGCACA GCTTCACGAC GATCGAGCAG
CTCGACCGCT GGGGCGTGAA GTTCGAGAAG GACGGCACCG GCGACTACGC GGTGAAGAAG
GTCCATCACA TGGGCTCGTA CGTGCTGCCG ATGCCGGAGG GCCACGACAT CAAGAAGGTG
CTGTACCGGC AACTGAAGCG CGCACGCATC GCGATCACGA ACCGGATCGT CGCGACGCGC
GTGCTGACCG ACGCGCAGGG CCGCGCGAGC GGCGTGCTCG GCTTCGACTG CCGCACCGCC
GACTTCCACG TGATCCGCGC GAAGGCCGTG ATTCTCTGCT GCGGCGCGGC CGGCCGTCTC
GGGCTGCCGG CGTCGGGCTA CCTGATGGGC ACGTACGAGA ACCCGACCAA CGCGGGCGAC
GGCTATGCGA TGGCCTATCA CGCGGGCGCC GCGCTCGCGA ACCTCGAATG CTTCCAGATC
AATCCGCTGA TCAAGGATTA CAACGGCCCG GCGTGCGCGT ACGTGACGGG GCCCCTGGGC
GGCTTCACCG CGAACGGCAA GGGCGAACGC TTCATCGAAT GCGACTACTG GAGCGGCCAG
ATGATGTGGG AGTTCTACCA GGAACTGCAG AGCGGCAACG GCCCCGTGTT CCTGAAGCTC
GACCATCTCG CGGAAGAAAC GATCCGGACC ATCGAGCAGA TCCTGCATAC CAACGAACGG
CCCAGCCGCG GCCGCTTCCA TGCGGGGCGC GGCACCGACT ACCGCAGCCA GATGGTCGAG
ATGCACATCT CCGAGATCGG CTTCTGCAGC GGCCACAGCG CGTCGGGCGT GTACGTGAAC
GCACGTGCCG AGACGACCGT GCCGGGGCTT TACGCGGCCG GCGACATGGC GGCCGTCCCG
CACAACTACA TGCTCGGGGC ATTCACGTAC GGCTGGTTCG CCGGGCAAAA CGCGGCCGAC
TACGTGGCCG GCCGCGACCA CGCGCCGGTG GACGACCAAC AGGTCGACGC CGAGCGCACC
CGCGTGCTCG CACCGCTGCT GCGCGAACGC GGGCTGGCGC CGGCGCAGGT CGAGTACAAG
CTGCGCCGGA TGGTGAACGA CTACCTGCAA CCGCCGAAGG TGACGCGCAA GATGGAGATC
GGGCTGCAAC GTTTTGACGG AATTATTAAG GATATCGAAG AAATCAAGGC CGAAAATCCG
CACGAGCTGA TGCGTGCGGC CGAAGTGCGC GCGATCCGCG ATTGCGCCGA AATGGCCGCG
CGTGCGTCGC TGTTCCGCAC CGAAAGCCGC TGGGGCCTGT ACCACCATCG CGTCGATTTT
CCGCACCGCA ACGACGCCGA ATGGTTCTGC CACACGTGGT TGCGCAAGGA TGCCGAGGGC
GCGATGCGCA GCGAGAAGCG GCCGGTCGAA CCGTACGTCG TGCCGCTCGC CGACGACGAA
CGCGGTGCCT ACGCGCAGTT GCGCATCCGC GAACCGGCCG CGCTCGCGGC CGCCCTTTGA
|
|---|
| Protein sequence | MNTHVHEYDV VVVGGGTAGP MAAIKAKERD PSLRVLLLEK ANVKRSGAIS MGMDGLNNAV
IPGHATPEQY TREITIANDG IVDQEAVYAY ATHSFTTIEQ LDRWGVKFEK DGTGDYAVKK
VHHMGSYVLP MPEGHDIKKV LYRQLKRARI AITNRIVATR VLTDAQGRAS GVLGFDCRTA
DFHVIRAKAV ILCCGAAGRL GLPASGYLMG TYENPTNAGD GYAMAYHAGA ALANLECFQI
NPLIKDYNGP ACAYVTGPLG GFTANGKGER FIECDYWSGQ MMWEFYQELQ SGNGPVFLKL
DHLAEETIRT IEQILHTNER PSRGRFHAGR GTDYRSQMVE MHISEIGFCS GHSASGVYVN
ARAETTVPGL YAAGDMAAVP HNYMLGAFTY GWFAGQNAAD YVAGRDHAPV DDQQVDAERT
RVLAPLLRER GLAPAQVEYK LRRMVNDYLQ PPKVTRKMEI GLQRFDGIIK DIEEIKAENP
HELMRAAEVR AIRDCAEMAA RASLFRTESR WGLYHHRVDF PHRNDAEWFC HTWLRKDAEG
AMRSEKRPVE PYVVPLADDE RGAYAQLRIR EPAALAAAL
|
|---|
| |