Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1994 |
Symbol | |
ID | 6123658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2217204 |
End bp | 2218439 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641638566 |
Product | major facilitator transporter |
Protein accession | YP_001765277 |
Protein GI | 170733330 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.392153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACGCC ACATGCCGGA TTCCCGATAC CGCTGGGTAA TCGTCGCCGC GGGCGGCCTG ATGGGCTGCG TCGCGATCGG CGCGATGTTC TCGTTGCCGG TGTTCCTGCG GTCCATCGCG CGCGATACGG GCTGGTCGAT GACCGGCATT TCCGCGGCGA TGACGCTTGG CTTCATCGCG ATGGCGTTCG CCAGCATGGC GTGGGGCAGC CTGTCGGACC GCGTCGGCAC GCGCCCGGTC GTCATCGCGG GCGCCGTGCT GTTGCCGGCG AGCCTGGCGC TGGCGAGCCG CGCGCCGTCG CTGCTCGTGT TCCAGTTGAC CTTCGGCCTG GCCGTGGGCA GTGCGACGGC CGCGATATTC GCGCCGATGA TGGCGTGCGT GACCGGCTGG TTCGACACGC ACCGCAGCCT CGCGGTATCG CTCGTGTCGG CCGGCATGGG GATGGCGCCG ATGACGATGG CGCCGCTGGC CGCCTGGCTC GTGTCGGTGC GCGACTGGCG CACGTCGATG CTGCTGATCG CCGCGCTGGC GGCCGTCGTG ATGATCCCGG TGTCGCTGCT GGTGCGCCGG GCGCCCGCGC TCGATCCTGC ATCCGCCCAC GCGGCGCCTG CGCCTGCGTC GGCCGGCGCG CCCGCCGCGA TGTCGGTCGC GGATGCGCTG CGTTCGCCGC AGTTCATGGT GTTGGTGCTG ACCAATTTCC TCTGCTGCGC GACCCATTCG GGCCCGATCT TCCATACGGT CAGCTACGCG GTGACCTGCG GGATTCCGCT GATCGTCGCG GTATCGATCT ACAGCGTCGA AGGGCTGGCG GGCATGGGCG GCCGGATCGC GTTCGGGGTC CTCGGCGATC GCCTCGGCGC GAAGCGCATG CTGGTGGCGG GGCTGCTCGC GCAGGCGCTC GGCGCGCTCG GCTACTACTT CGTGCGCACG CTCGACGGTT TCTACGCGGT CGCGACGCTG TTCGGCTTCA TCTATGCGGG CGTGATGCCG CTGTATTCGG TGCTCGCGCG CGAGAATTTC CCGCTGCGGA TGATGGGCAC CGTGATCGGC GGCTGCGCGA TGGCCGGCAG CCTCGGGATG GCCGCGGGCC CGGTCGCCGG CGGGCTGATC GTCGATGCGT TCGGCAGCTA CGGCTGGCTG TACCTCGGCT CGTTCGCGAT CGGGCTCGGC GCGTTCCTGA TCGCGACGAT GTTCCGCCCG TTCGCGAAGG CGCGGCCGGA AGCGGTGGCG GCGTGA
|
Protein sequence | MTRHMPDSRY RWVIVAAGGL MGCVAIGAMF SLPVFLRSIA RDTGWSMTGI SAAMTLGFIA MAFASMAWGS LSDRVGTRPV VIAGAVLLPA SLALASRAPS LLVFQLTFGL AVGSATAAIF APMMACVTGW FDTHRSLAVS LVSAGMGMAP MTMAPLAAWL VSVRDWRTSM LLIAALAAVV MIPVSLLVRR APALDPASAH AAPAPASAGA PAAMSVADAL RSPQFMVLVL TNFLCCATHS GPIFHTVSYA VTCGIPLIVA VSIYSVEGLA GMGGRIAFGV LGDRLGAKRM LVAGLLAQAL GALGYYFVRT LDGFYAVATL FGFIYAGVMP LYSVLARENF PLRMMGTVIG GCAMAGSLGM AAGPVAGGLI VDAFGSYGWL YLGSFAIGLG AFLIATMFRP FAKARPEAVA A
|
| |