Gene Bcenmc03_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1994 
Symbol 
ID6123658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2217204 
End bp2218439 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content70% 
IMG OID641638566 
Productmajor facilitator transporter 
Protein accessionYP_001765277 
Protein GI170733330 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.392153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCC ACATGCCGGA TTCCCGATAC CGCTGGGTAA TCGTCGCCGC GGGCGGCCTG 
ATGGGCTGCG TCGCGATCGG CGCGATGTTC TCGTTGCCGG TGTTCCTGCG GTCCATCGCG
CGCGATACGG GCTGGTCGAT GACCGGCATT TCCGCGGCGA TGACGCTTGG CTTCATCGCG
ATGGCGTTCG CCAGCATGGC GTGGGGCAGC CTGTCGGACC GCGTCGGCAC GCGCCCGGTC
GTCATCGCGG GCGCCGTGCT GTTGCCGGCG AGCCTGGCGC TGGCGAGCCG CGCGCCGTCG
CTGCTCGTGT TCCAGTTGAC CTTCGGCCTG GCCGTGGGCA GTGCGACGGC CGCGATATTC
GCGCCGATGA TGGCGTGCGT GACCGGCTGG TTCGACACGC ACCGCAGCCT CGCGGTATCG
CTCGTGTCGG CCGGCATGGG GATGGCGCCG ATGACGATGG CGCCGCTGGC CGCCTGGCTC
GTGTCGGTGC GCGACTGGCG CACGTCGATG CTGCTGATCG CCGCGCTGGC GGCCGTCGTG
ATGATCCCGG TGTCGCTGCT GGTGCGCCGG GCGCCCGCGC TCGATCCTGC ATCCGCCCAC
GCGGCGCCTG CGCCTGCGTC GGCCGGCGCG CCCGCCGCGA TGTCGGTCGC GGATGCGCTG
CGTTCGCCGC AGTTCATGGT GTTGGTGCTG ACCAATTTCC TCTGCTGCGC GACCCATTCG
GGCCCGATCT TCCATACGGT CAGCTACGCG GTGACCTGCG GGATTCCGCT GATCGTCGCG
GTATCGATCT ACAGCGTCGA AGGGCTGGCG GGCATGGGCG GCCGGATCGC GTTCGGGGTC
CTCGGCGATC GCCTCGGCGC GAAGCGCATG CTGGTGGCGG GGCTGCTCGC GCAGGCGCTC
GGCGCGCTCG GCTACTACTT CGTGCGCACG CTCGACGGTT TCTACGCGGT CGCGACGCTG
TTCGGCTTCA TCTATGCGGG CGTGATGCCG CTGTATTCGG TGCTCGCGCG CGAGAATTTC
CCGCTGCGGA TGATGGGCAC CGTGATCGGC GGCTGCGCGA TGGCCGGCAG CCTCGGGATG
GCCGCGGGCC CGGTCGCCGG CGGGCTGATC GTCGATGCGT TCGGCAGCTA CGGCTGGCTG
TACCTCGGCT CGTTCGCGAT CGGGCTCGGC GCGTTCCTGA TCGCGACGAT GTTCCGCCCG
TTCGCGAAGG CGCGGCCGGA AGCGGTGGCG GCGTGA
 
Protein sequence
MTRHMPDSRY RWVIVAAGGL MGCVAIGAMF SLPVFLRSIA RDTGWSMTGI SAAMTLGFIA 
MAFASMAWGS LSDRVGTRPV VIAGAVLLPA SLALASRAPS LLVFQLTFGL AVGSATAAIF
APMMACVTGW FDTHRSLAVS LVSAGMGMAP MTMAPLAAWL VSVRDWRTSM LLIAALAAVV
MIPVSLLVRR APALDPASAH AAPAPASAGA PAAMSVADAL RSPQFMVLVL TNFLCCATHS
GPIFHTVSYA VTCGIPLIVA VSIYSVEGLA GMGGRIAFGV LGDRLGAKRM LVAGLLAQAL
GALGYYFVRT LDGFYAVATL FGFIYAGVMP LYSVLARENF PLRMMGTVIG GCAMAGSLGM
AAGPVAGGLI VDAFGSYGWL YLGSFAIGLG AFLIATMFRP FAKARPEAVA A