| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1985 |
|---|
| Symbol | |
|---|
| ID | 6123649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2208689 |
|---|
| End bp | 2209702 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641638557 |
|---|
| Product | allantoicase |
|---|
| Protein accession | YP_001765268 |
|---|
| Protein GI | 170733321 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG4266] Allantoicase |
|---|
| TIGRFAM ID | [TIGR02961] allantoicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.55948 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTTC CGCTTCTCGA TCCGAACGCA CCCGATTTCA CGCGGCGCTA CGTGAATCTT
GCCGACCCGC GTCTCGGTGC GCAGGCGCTC GAGGCCAGCG ACGATTTCTT CGCGCCGAAG
GACCGGATGC TGAACCCCGA GCCGGCCGTC TTCATCCCCG GCAAGTACGA CGACCACGGC
AAGTGGATGG ACGGCTGGGA AACGCGTCGC AAGCGCACGA CCGGCTACGA CTGGTGCATC
GTCAAGCTCG CGCGCCCGGG CGTGATCAAG GGCTTCGACA TCGACACGAG CCACTTCACC
GGCAACTTCC CGCCGGCGGC CTCGATCGAG GCCGCGTTCG TGGCCGACGG CGCGCCGACG
CAGGCGACCG AGTGGGTCGA GATCGTGCCG TCGACGACGC TGCAGGGCAA CAGCCATCAC
TACGTCGAAG CGAGCGACGC ACGGGCGTTC ACGCACCTGC GCGTGAACAT CTACCCGGAC
GGCGGCATCG CGCGCCTGCG TGTGTACGGC CAGCCGCAGC TCGACTGGGC CGGCGCGAGC
GCCACCGAGC AGTTCGACCT CGCGGCGATG GAAAACGGCG GTTACGTGGT GGCCGCGAAC
AACCAGCACT TCGGCGTCGC GTCGAACCTG CTGCTGCCGG GCCGCGGCGT GAACATGGGC
GACGGCTGGG AAACGCGCCG CCGTCGCGAG CCGGGCAACG ACTGGGCGAT CATCGCGCTC
GCGCAGCCGG GCGTGATCCG CAAGATCGAA GTCGATACCG CGTTCTTCAA GGGCAACTAC
CCGGATCGCT GCTCGATCCA GGCCGCCTAT GTGTCGGGCG GCACCGACAG CTCGCTGATC
ACGCAGTCGA TGTTCTGGCC GGTGCTGCTC GGCGAACAGA AGCTGCAGAT GGACAAGCAG
CACTACTTCG AACACGACAT CGCGTCGCTC GGCCCCGTCA CGCACGTGCG ACTGAACATC
ATTCCGGACG GCGGCGTGTC GCGCCTGCGC CTGTGGGGGA CGCTCGACAA ATGA
|
|---|
| Protein sequence | MAVPLLDPNA PDFTRRYVNL ADPRLGAQAL EASDDFFAPK DRMLNPEPAV FIPGKYDDHG
KWMDGWETRR KRTTGYDWCI VKLARPGVIK GFDIDTSHFT GNFPPAASIE AAFVADGAPT
QATEWVEIVP STTLQGNSHH YVEASDARAF THLRVNIYPD GGIARLRVYG QPQLDWAGAS
ATEQFDLAAM ENGGYVVAAN NQHFGVASNL LLPGRGVNMG DGWETRRRRE PGNDWAIIAL
AQPGVIRKIE VDTAFFKGNY PDRCSIQAAY VSGGTDSSLI TQSMFWPVLL GEQKLQMDKQ
HYFEHDIASL GPVTHVRLNI IPDGGVSRLR LWGTLDK
|
|---|
| |