| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1973 |
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| Symbol | |
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| ID | 6123637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 2197939 |
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| End bp | 2198619 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641638545 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_001765256 |
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| Protein GI | 170733309 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.961731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0785415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTTT TCGACTCTAT TTCGCGCACG ATCAAAGGCC TGCTGAACGA TGCGGCCGAT
TCGGTACAGG ATCCGTCGCG CGACGCACGG CAGATCGTGC GGGAGCTCGA CGACAGCATC
GGCCGTGCCG AGAATTCGCT GATCGAAATC GAGGCACAGG TCGCGACCCA GCGCAGCAAG
CGCGATGCGG CCGACGACAA GGTCAGGAAG TACGAGGACG GCGCGAAGCG CGCGCTGCAG
GGCGGCGACG AAGCGCTCGC CCGCGAGGCG CTCGCGGCCC AGTCGAACGC GGAAGCCGAG
CGCGATGCGC TCGCGGCCGA GCTGACGACG CTCGAGCCGT CGGTCGAGAA GCTGAAGGGG
CAGATCGCCG ACATGCGCCA GCGCCGCAAC GATCTGAACG CACGCTCGAA CATCCTGCAG
GCGAAGCAGG AAATCGCGCA GGCGAAGGAC GTCGCAGCCA GCGCGCTGGG CGGGATCGGC
GGCAAGAACC TGTCCGAGGA TTTCCAGAAG CTCGAGGACA AGGTCGCGCT GCAGAACGCG
CGCTCGGACG CACGCCTCAA TTCGGCCGAC ACGTCGAGCG GCAAGGCGCT CGACGACAAG
CTCGCCGCGC TGAACAAGGG CCCGTCGGTG GAAGATCGCC TCGCCGCGCT GAAGAAGCAG
CTCGATACGC CCGCGCAGTA A
|
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| Protein sequence | MSLFDSISRT IKGLLNDAAD SVQDPSRDAR QIVRELDDSI GRAENSLIEI EAQVATQRSK
RDAADDKVRK YEDGAKRALQ GGDEALAREA LAAQSNAEAE RDALAAELTT LEPSVEKLKG
QIADMRQRRN DLNARSNILQ AKQEIAQAKD VAASALGGIG GKNLSEDFQK LEDKVALQNA
RSDARLNSAD TSSGKALDDK LAALNKGPSV EDRLAALKKQ LDTPAQ
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