Gene Bcenmc03_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1965 
Symbol 
ID6123629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2186441 
End bp2186968 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content64% 
IMG OID641638537 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_001765248 
Protein GI170733301 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00777] alkylhydroperoxidase, AhpD family
[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.464314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0206029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCA TCGACTCGAT TAAGGCACGT ATCCCCGACT ACGCGAAGGA CATTCGCCTG 
AACCTCGACG GCACGATCTC GCGCTCGTCG CTCGAAGGCA CCGACGCGGT CGGCGTGGCG
CTGGCGGCGG CCATCGCGGC GAAGAGCACG GTGCTCGTGA AGACGATCCG CGAAGCCGGC
GTGCTGTCGC CCGAAGAGAC GAACGCCGTG CTGACGGCGG CCGCGCTGAT GGGGATGAAC
AACACCTGGT ATCCGTATGT CGAGATGGCC GACGACGCCG ACCTGAAGAC GCAGCGCGCC
GAATTGCGGA TGGGCGCGTA TGCGACGCAC GGCGGCGTCG ACAAGCGCAA GTTCGAGATG
TACGCGCTAG CGGCGTCGAT CGTCGGCAAG TGCCACTTCT GCGTGAAGTC GCACTATGCG
CTGCTGAAGA ACGAGCAAGG GATGACCGTC ACGCAACTGC GCGACGTCGG CCGCATCGCA
TCGGTGATCA ACGCCGCCGC GCAGGTGATC GCCGCCGAAG GCGAATAA
 
Protein sequence
MEFIDSIKAR IPDYAKDIRL NLDGTISRSS LEGTDAVGVA LAAAIAAKST VLVKTIREAG 
VLSPEETNAV LTAAALMGMN NTWYPYVEMA DDADLKTQRA ELRMGAYATH GGVDKRKFEM
YALAASIVGK CHFCVKSHYA LLKNEQGMTV TQLRDVGRIA SVINAAAQVI AAEGE