| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1954 |
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| Symbol | |
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| ID | 6123618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 2174973 |
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| End bp | 2176082 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641638525 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001765237 |
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| Protein GI | 170733290 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00466177 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCA CTGCCTTCTT CACCGACGAA CGCACTTTCT GGCATACCGG CGGCACGCAT
GCGCTGTTCT TCCCGGTCGG TGGCTGGGTC CAGCCGCCGT CGAGCGCGGG CTACGCGGAA
TCGCCCGATT CGAAGCGCCG CTTCCTGTCG CTCGTGCAGG CGTCGGGCCT GGCCGCGCAG
CTCGACCTGC GCGGCGCCGA GCCCGCGACG ACGGCCGACC TGCTGCGCAT CCATCCGGCG
CACTATCTCG ATGCATTTCG CGCGCTGAGC GACGCGAACG GTGGCGACCT CGGCGATCTC
GCGCCATTCG GCAAGGGCAG CTACGAGATC GCCGCGCTGT CGGCCGGTCT CGCGATCGGG
GCGGTCGATG CGGTCGTCGG CGAGCGCGCG GCGAATGCGT TCTCGCTGTC GCGGCCGCCC
GGCCATCACT GCCTGCGCGA CCGTCCGATG GGCTTCTGCA TGCTCGCGAA CATTCCGATC
GCGATCGAGG CCGCGCGCGC GAAGCACGGC ATCGAGCGCG TCGCGGTGAT CGACTGGGAC
GTGCATCACG GCAACGGCAC GCAGTCGATC TACTACGACG ATCCCGATAC GCTGACGATC
TCGCTGCACC AGGATCGCTG CTTCCCGCCC GGCTACAGCG GCGCGGACGA TCGCGGCGAA
GGCGCGGGCA TCGGCGCGAA CCTGAACGTG CCGCTGCTCG CGGGTAGCGG CGACGACGCC
TACCGGTATG CGTTCGAGCG GATCGTGCTG CCGGCGCTCG CGCGGTTCCG CCCCGAGCTG
ATCGTCATCG CGAGCGGCCT CGATGCGAGC GCGGTCGATC CGCTCGCGCG CATGCAGTTG
CATACCGACA GCTACCGGTT CATGACGCGC GCGGTGAAGG AAGCCGCGCA GCGCCATTGC
AGCGGGCGGC TCGTAATCGT TCACGAAGGC GGCTATTCGG AGGCGTACGT GCCGTTCTGC
GGGCTCGCGA TCGTCGAGGA ACTGGCCGGC ATCCGCACCG CGGTCGCCGA TCCGATGCTC
GATCTGGCGA TCGCGCAGCA GCCGGGCCCG CGGTTCGTCG CGTTCCAGCG CGCACTGCTC
GACGAACTGG CCGCGTCGTT CGGGTTGTAA
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| Protein sequence | MNRTAFFTDE RTFWHTGGTH ALFFPVGGWV QPPSSAGYAE SPDSKRRFLS LVQASGLAAQ
LDLRGAEPAT TADLLRIHPA HYLDAFRALS DANGGDLGDL APFGKGSYEI AALSAGLAIG
AVDAVVGERA ANAFSLSRPP GHHCLRDRPM GFCMLANIPI AIEAARAKHG IERVAVIDWD
VHHGNGTQSI YYDDPDTLTI SLHQDRCFPP GYSGADDRGE GAGIGANLNV PLLAGSGDDA
YRYAFERIVL PALARFRPEL IVIASGLDAS AVDPLARMQL HTDSYRFMTR AVKEAAQRHC
SGRLVIVHEG GYSEAYVPFC GLAIVEELAG IRTAVADPML DLAIAQQPGP RFVAFQRALL
DELAASFGL
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