| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1952 |
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| Symbol | |
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| ID | 6123616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 2172682 |
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| End bp | 2173728 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641638523 |
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| Product | porin |
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| Protein accession | YP_001765235 |
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| Protein GI | 170733288 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0650784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACAC CCCGCTTCAT CCGCACGGCC GCCGCCGCCG CGACGCTGGC CGCATGCGGC
GCCGCGGCGC AGGCGCAGTC CGCCCTCACG CTGTATGGCG CGCTCGACGC CGGCGTGCAA
TACCTGACGC ACGCCGACGG GCATCGTTCG GCCGTGCGGT TGCAGAACTA CGGCATCCTG
CCTTCACAGG TCGGGATCAA GGGTCACGAG GATCTCGGCG GCGGCTGGCG TGCGCTGTTC
AAACTCGAAC AGGGCCTCAA CCTCAACGAC GGCACCGCGA CCGTGCCCGG CTACGCGTTC
TTTCGCGGCG CATACGTCGG CATCGCGGGG CCGGTCGGCA CCGTCACGCT CGGCCGCCAG
TTCAGCGTGC TGTTCGACAA GACGCTGTTC TACGACCCGC TCTGGTACGG GTCGTACAGC
GGCCAGGGCG TGCTCGTGCC GATGAACGCG AACTTCATCG ACCATTCGGT CAAATACCAG
TCGCCGACGT TCGCCGGCTT CGACGTCGAG GCGCTCGCCG CGACCGCCGG CGTCGCCGGC
AATACGCGCG CCGGACGCGT GCTCGAGCTC GGCGGCCAGT ACACGAGCAA CGGCCTGTCG
GTCGGCGCGG TGCTGCACCA GGCGCACGGC GACGTATCGG CGGCCGACGA CGCGTCCGCG
CGGCGTCGCG AACTCGGCAC GCTCGCCGCG CGCTATGCGT TCGCCACGCT GCCGCTCACC
GTCTATGCAG GCGTCGAGCG CCTCACCGGC GACCTCGACG CGGCGCGCAC GATCGTCTGG
GGCGGCGCGC GCTACCTGAC GTCGAACGGA ATCGGCCTGA ACGCGGGCGT CTACCACACC
GATTCGCACA CGCCGACGAT CGGCCATCCG ACGCTGTTCA TCGCGAGCAC CACGTATGCC
CTGTCGAAAC GCACCGTCGC CTACGTGAAC CTCGGCTATG CGCGCAATAG CGGCCAGAGT
TCGCAGACCG TCTACGAATA CGACCCCACG CCGCTCGCCG GCGCGTCGCA GTTCGGCGCG
ATGGTCGGCA TGTACCACCT GTTCTGA
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| Protein sequence | MTTPRFIRTA AAAATLAACG AAAQAQSALT LYGALDAGVQ YLTHADGHRS AVRLQNYGIL
PSQVGIKGHE DLGGGWRALF KLEQGLNLND GTATVPGYAF FRGAYVGIAG PVGTVTLGRQ
FSVLFDKTLF YDPLWYGSYS GQGVLVPMNA NFIDHSVKYQ SPTFAGFDVE ALAATAGVAG
NTRAGRVLEL GGQYTSNGLS VGAVLHQAHG DVSAADDASA RRRELGTLAA RYAFATLPLT
VYAGVERLTG DLDAARTIVW GGARYLTSNG IGLNAGVYHT DSHTPTIGHP TLFIASTTYA
LSKRTVAYVN LGYARNSGQS SQTVYEYDPT PLAGASQFGA MVGMYHLF
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