Gene Bcenmc03_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1951 
Symbol 
ID6123615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2171234 
End bp2172379 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content70% 
IMG OID641638522 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001765234 
Protein GI170733287 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0248785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGATCA CGACGGATAT CGGGCAGGAT CTCGACGCGC TGCGCGACGT GCCGGCCGCC 
ATCGTGCTCG ACGAATTCGC GTGGCCGCCG CGGCCGTCCC GGCGTGCCGA TTTCGACGGC
GTCGCGCGCG GCGACGCGCC GCGGCGCGAA CTCGGGCTGA TGCTGCTCGA CCTGTATGCG
GTGGCCGCGC AGTCCGCCAT CGGCGAATTC GAATGCCGGT TCTTTTCGCT GCTGCAGGCG
CTCATTCCGT TCGATGCCGC GTGGACCGGC GTCGCAACCC ATGTGCCGAC CGGCCCGGTG
ATGCACAACA GCTTTTTGTA CCGGTTGCCG CACGCGTTCT TCATCGACTG GAAGCGCGTG
CGCGATTGCG ATCCGCTCGC GCACCGCACG TTGCACGGCG CGCACGGCCG CGCGGTGCGG
CTGACGGTCG TCGAGCCGGG GCTCGATGCG CGGTTTCGCG ACTGGTGCGT GAAGTACGGG
CTCGCGCAGC TGATGTGCGT GTGTACGCTC GATCGCCGCT TCGGCCTGAC GACGTTCATG
TCGATCTACC GCCAGGGTCT GAATCGGCCG TTCAGCGACG ACGACGCACG GTGTTTCGAG
GAAGTGATCC CGCATCTGGC CGCCGCGCTG ACGATCAATC GCGCCGCGCA GCTCACGCGC
GAACGCGCCG ACACGGTTGC ACCGGCGGCG CGTGCGCTGT GCGACAACTT CGGGGTGCTG
CACCATGCCG ATCACGGTTT CGACGACGTG CTGCGCACCG AATGGCCGTC GTGGGCCGGC
GCGCGCGTGC CGGAGCCGCT GGTCGCGCAC CTGCGGCGCC AGTCGGGCCA GCCGTTCGTC
GGCGACGCGC TGCGTATCCA GTGCGTGCCG GTTGCGGGGC TGTTCCAGAT CGAGGCGCGG
CCGCGCTCGC TGCTCGACCG GCTGAGCCCG CGCGAACTCG CGGCGATCCG CTATTACGGC
GCCGGGCGTT CGCACAAGGA GGTCGCGCAG CAGATGGCAA TCTCGCCGAC GACCGTGCGC
CACTACCTGC GCTGCGCGTA CCGCAAGCTC GGCATGCACG ACAAGAGCCA GATCGCCGGC
GTGCTGGGCG CGACGGGCGG CGCGTCCGAC GACGAGGCGA TGGAAGCCGG CGGCATGCCG
CGCTGA
 
Protein sequence
MRITTDIGQD LDALRDVPAA IVLDEFAWPP RPSRRADFDG VARGDAPRRE LGLMLLDLYA 
VAAQSAIGEF ECRFFSLLQA LIPFDAAWTG VATHVPTGPV MHNSFLYRLP HAFFIDWKRV
RDCDPLAHRT LHGAHGRAVR LTVVEPGLDA RFRDWCVKYG LAQLMCVCTL DRRFGLTTFM
SIYRQGLNRP FSDDDARCFE EVIPHLAAAL TINRAAQLTR ERADTVAPAA RALCDNFGVL
HHADHGFDDV LRTEWPSWAG ARVPEPLVAH LRRQSGQPFV GDALRIQCVP VAGLFQIEAR
PRSLLDRLSP RELAAIRYYG AGRSHKEVAQ QMAISPTTVR HYLRCAYRKL GMHDKSQIAG
VLGATGGASD DEAMEAGGMP R