Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1940 |
Symbol | pgi |
ID | 6123604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2155880 |
End bp | 2157502 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641638509 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_001765223 |
Protein GI | 170733276 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.478064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCTGA AATCGCTCCC CGCCTGGACT GCCCTTCAAT CCCACTTCGA ACAGATCCGC CACGCGCGGC TGCGCGACTG GTTCGCGCCG GAAAACGATC GCGCGCCGAC CCGCGCCGAA CGCTTCACGA TTCCGGGCGG CGGTCTCGCG GCCGATTTCT CGAAGAACCG CATCGACGAC GAAACGCTGC GCCTGCTCGT GCAGCTCGCG CGCGACGCGG GCGTCGAGGC GCGCCGCGAC GCGATGTTCG CGGGCGAGAT CGTTAACCCG ACCGAAGGCC GCGCCGCGCT GCACACCGCG CTGCGCGCGA CCGACCCGCA AGCACCGTTC CATGCGCAGG TGAGCGCCGA GCGCGCGAAG ATGGCGACGT TCGCGCGCGC CGTACGCAGC GGCACGTGGA CGGGCTATAC GGGCAAGCGC ATCCGCCACG TGATCAACAT CGGCATCGGC GGCTCCGATC TCGGCCCGAA GATGGTCGTG CATGCGCTGC ACCACGTCGC GACGCCCGAG ATCTCGACGC ACTTCGTGTC GAACGTCGAC GGCGCCGATC TCGCGCGCGT GCTCGAACAG GTCGATCCCG AGGAAACGCT CGCGATCATC GTGTCGAAGA CCTTCACGAC GCTCGAGACG ATGACGAACG CACGCTCGCT GCGCGACTGG TTCGTCGCGC GCGGCTGCCC CGAAGATGCG CTCGCGAAAC ACTTCGTCGG CGTGTCGGCG AACCCGGCCG AAGTCGTGAA GTTCGGCATC GCCGCGGACA ACGTGTTCGA AATGTGGGAC TGGGTCGGCG GCCGCTATTC GCTGTGGTCG GCGGTCGGCC TGTCGATCAT GATCGCGATC GGCCCCGAAC AGTTCGACGA ACTGCTGGCC GGCGCGAACG ACATGGACCG CCACTTCCGC GAAGCGCCGC TCGAGCGCAA CCTGCCGGTG CTGCTCGGCC TGATCGGCAT CTGGTACCGG AATTTCTTCG GCTCGCAGAG CTATCTCGTC GCGCCGTATT CGGAAGCGCT GCACTACCTG CCGTCGTACC TCCAGCAGCT CGAAATGGAG AGCAACGGCA AATCCGCGCG CCTGGACGGC ACCTTCGTCG ACTACCCGAC GTCGGCCGTC ACGTGGGGCG AGCCGGGCAC CAACGGCCAG CATGCGTTCT TCCAGATGCT GCACCAGGGG CCGACGATCG TGCCGATCGA CTTCATCGCG GTGCTGACGC CCGAACATCC GCTCGCGAGC CATCATCCGA AGCTGCTCGC GAACTGCTTC GCGCAGAGCG AAGCGCTGAT GCTCGGCCGC ACGCTCGAGG AAGCGCGCAA GGTCGCCGGG CCCGGCAAGG AAGCGCTCGC GCCGCACCTG ACGTTCCCCG GCAACCGCCC GACCACGACG CTGCTCGTCG ATGCGCTGAC ACCGCGCACG CTCGGCGCGC TGATCGCGCT TTACGAGCAC AAGGTGCTCG TGCAGGCGAC GGTGTGGGAC ATCAATCCGT TCGACCAGTG GGGCGTCGAG CTCGGCAAGA TTCTCGGCAA GGTGGTGGAA GCCGACCTGT CGGCCGAATC GGTCGATCCG GCGAAGCACG ACTCGTCGAC CACCGCGCTG ATCGAGCGCG CCCGCGCGGC GCTCAAGCGT TGA
|
Protein sequence | MTLKSLPAWT ALQSHFEQIR HARLRDWFAP ENDRAPTRAE RFTIPGGGLA ADFSKNRIDD ETLRLLVQLA RDAGVEARRD AMFAGEIVNP TEGRAALHTA LRATDPQAPF HAQVSAERAK MATFARAVRS GTWTGYTGKR IRHVINIGIG GSDLGPKMVV HALHHVATPE ISTHFVSNVD GADLARVLEQ VDPEETLAII VSKTFTTLET MTNARSLRDW FVARGCPEDA LAKHFVGVSA NPAEVVKFGI AADNVFEMWD WVGGRYSLWS AVGLSIMIAI GPEQFDELLA GANDMDRHFR EAPLERNLPV LLGLIGIWYR NFFGSQSYLV APYSEALHYL PSYLQQLEME SNGKSARLDG TFVDYPTSAV TWGEPGTNGQ HAFFQMLHQG PTIVPIDFIA VLTPEHPLAS HHPKLLANCF AQSEALMLGR TLEEARKVAG PGKEALAPHL TFPGNRPTTT LLVDALTPRT LGALIALYEH KVLVQATVWD INPFDQWGVE LGKILGKVVE ADLSAESVDP AKHDSSTTAL IERARAALKR
|
| |