Gene Bcenmc03_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1930 
Symbol 
ID6123594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2142112 
End bp2143755 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content68% 
IMG OID641638499 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_001765213 
Protein GI170733266 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.049446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAGC CGTTGCTGGG CCAGATGATG GATGTGCCGC TGCTGGTGTC GTCGCTGATT 
TCGCATGCCG CGCGGCACGC CGGCGACACG GAGATCGTGT CGAAGCGCGT GGAAGGCGAC
CTGCATCGCT ACACGTACCG CGATTGCGAA CGCCGCGCGA AGCAGCTGGC GCAGGCGCTC
GCGCGGCTCG GCGTCGAGAC CGGCGACCGC GTCGGCACGC TGGCGTGGAA CGGCTACCGG
CACCTGGAAG CGTATTACGG GATCGGCGGG ATGGGCGCCG TATGCCACAC GATCAACCCG
CGCCTGTTTC CCGAGCAGAT CGCGTACATC GTCAATCACG CGGAAGACCG CTACGTCTTC
TTCGACATCA ATTTCGCGCC GCTCGTCGAT GCGATCGCGC CGCAATGCCC GCACGTGAAG
GGCTGGATCG CGATGACGGA CGCCGCGCAC CTGCCGTCCG GCGCGACGCC GTTCCTCTGC
TACGAAACGC TCGTCGAAGC CGAGGACGGG CGCTACGACT GGCCGCGCCT CGACGAGCAG
CAGGCGTCGG GGCTCTGCTA CACGTCGGGC ACGACCGGCA ACCCGAAGGG CGTGCTGTAT
TCGCATCGCT CGACCGTGCT GCATGCTTAC GGCGCCGCGC TGCCCGACGC GATGAACCTG
TCCGCGATGG ACGCCGTGCT GCCCGTCGTG CCGATGTTCC ACGTCAACGC GTGGGGGTTG
CCGTACGCGG TGCCGCTGAC TGGCGGCAAG CTCGTGCTGC CCGGCAAGGA TCTCGACGGG
AAATCGCTGT ACGAGCTGAT GGAGGCCGAG CGCGTGACGT TCTCCGCGGG CGTGCCGACC
GTGTGGCTCG GCCTGCTGAA CTACATGCGC GAAGCCGGCG TGCGTTTCTC GACGCTGAAC
CGCACGGTGA TCGGCGGCTC CGCATGCCCG CCCGCGATGC TGCGCACGTT CGAGGACGAA
TACGGCGTGC GCGTGATCCA TGCGTGGGGG ATGACCGAAC TGTCGCCGCT CGGCACGCTC
GCGAAGCTCA ACTGGGCGCA GTCGCAGCGG CCGCTCGACG CGCAGCGCCG GCTGCTCGAA
AAGCAGGGGC GCGTGATCTG CGGCGTCGAC ATGCGGATCG TCGGCGACGA CGGCCGCGAA
CTGCCGTGGG ACGGCGTCGC ATTCGGCGAA CTGCAGGTGC GCGGGCCGTG GGTGATCGAC
CACTACTTTC GCGGCGATGC GTCGCCGCTG TCGGACGGCT GGTTTCCGAC CGGCGACGTC
GCGACGATCG ACCCCGACGG CTTTCTGCAG ATCACCGACC GCAGCAAGGA CGTGATCAAG
TCGGGCGGCG AGTGGATCAG CTCGATCGAC ATCGAGAACG TCGCGATCGC GCATCCCGGG
GTGGCCGAAG CCGCGTGCAT CGCGTGCGCG CATCCGAAAT GGACCGAGCG ACCGCTGCTC
GTCGTGGTGC CGCGCGAAGG CGCGAACCTG ACCCGCGACA CGCTGCTCGC GTTCTACGAG
GGCAAGGTCG CGAAATGGTG GATTCCGGAC GACGTCGTGT TCGTCGAATC GTTGCCGCAC
ACCGCGACCG GCAAGCTGCA GAAGCTGAAG TTGCGCGAGA CGTTCCGCGA TTACGTGTTG
CCCACGGCGG TGTGCGCGCC GTAA
 
Protein sequence
MGKPLLGQMM DVPLLVSSLI SHAARHAGDT EIVSKRVEGD LHRYTYRDCE RRAKQLAQAL 
ARLGVETGDR VGTLAWNGYR HLEAYYGIGG MGAVCHTINP RLFPEQIAYI VNHAEDRYVF
FDINFAPLVD AIAPQCPHVK GWIAMTDAAH LPSGATPFLC YETLVEAEDG RYDWPRLDEQ
QASGLCYTSG TTGNPKGVLY SHRSTVLHAY GAALPDAMNL SAMDAVLPVV PMFHVNAWGL
PYAVPLTGGK LVLPGKDLDG KSLYELMEAE RVTFSAGVPT VWLGLLNYMR EAGVRFSTLN
RTVIGGSACP PAMLRTFEDE YGVRVIHAWG MTELSPLGTL AKLNWAQSQR PLDAQRRLLE
KQGRVICGVD MRIVGDDGRE LPWDGVAFGE LQVRGPWVID HYFRGDASPL SDGWFPTGDV
ATIDPDGFLQ ITDRSKDVIK SGGEWISSID IENVAIAHPG VAEAACIACA HPKWTERPLL
VVVPREGANL TRDTLLAFYE GKVAKWWIPD DVVFVESLPH TATGKLQKLK LRETFRDYVL
PTAVCAP