Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1930 |
Symbol | |
ID | 6123594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2142112 |
End bp | 2143755 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641638499 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_001765213 |
Protein GI | 170733266 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.049446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTAAGC CGTTGCTGGG CCAGATGATG GATGTGCCGC TGCTGGTGTC GTCGCTGATT TCGCATGCCG CGCGGCACGC CGGCGACACG GAGATCGTGT CGAAGCGCGT GGAAGGCGAC CTGCATCGCT ACACGTACCG CGATTGCGAA CGCCGCGCGA AGCAGCTGGC GCAGGCGCTC GCGCGGCTCG GCGTCGAGAC CGGCGACCGC GTCGGCACGC TGGCGTGGAA CGGCTACCGG CACCTGGAAG CGTATTACGG GATCGGCGGG ATGGGCGCCG TATGCCACAC GATCAACCCG CGCCTGTTTC CCGAGCAGAT CGCGTACATC GTCAATCACG CGGAAGACCG CTACGTCTTC TTCGACATCA ATTTCGCGCC GCTCGTCGAT GCGATCGCGC CGCAATGCCC GCACGTGAAG GGCTGGATCG CGATGACGGA CGCCGCGCAC CTGCCGTCCG GCGCGACGCC GTTCCTCTGC TACGAAACGC TCGTCGAAGC CGAGGACGGG CGCTACGACT GGCCGCGCCT CGACGAGCAG CAGGCGTCGG GGCTCTGCTA CACGTCGGGC ACGACCGGCA ACCCGAAGGG CGTGCTGTAT TCGCATCGCT CGACCGTGCT GCATGCTTAC GGCGCCGCGC TGCCCGACGC GATGAACCTG TCCGCGATGG ACGCCGTGCT GCCCGTCGTG CCGATGTTCC ACGTCAACGC GTGGGGGTTG CCGTACGCGG TGCCGCTGAC TGGCGGCAAG CTCGTGCTGC CCGGCAAGGA TCTCGACGGG AAATCGCTGT ACGAGCTGAT GGAGGCCGAG CGCGTGACGT TCTCCGCGGG CGTGCCGACC GTGTGGCTCG GCCTGCTGAA CTACATGCGC GAAGCCGGCG TGCGTTTCTC GACGCTGAAC CGCACGGTGA TCGGCGGCTC CGCATGCCCG CCCGCGATGC TGCGCACGTT CGAGGACGAA TACGGCGTGC GCGTGATCCA TGCGTGGGGG ATGACCGAAC TGTCGCCGCT CGGCACGCTC GCGAAGCTCA ACTGGGCGCA GTCGCAGCGG CCGCTCGACG CGCAGCGCCG GCTGCTCGAA AAGCAGGGGC GCGTGATCTG CGGCGTCGAC ATGCGGATCG TCGGCGACGA CGGCCGCGAA CTGCCGTGGG ACGGCGTCGC ATTCGGCGAA CTGCAGGTGC GCGGGCCGTG GGTGATCGAC CACTACTTTC GCGGCGATGC GTCGCCGCTG TCGGACGGCT GGTTTCCGAC CGGCGACGTC GCGACGATCG ACCCCGACGG CTTTCTGCAG ATCACCGACC GCAGCAAGGA CGTGATCAAG TCGGGCGGCG AGTGGATCAG CTCGATCGAC ATCGAGAACG TCGCGATCGC GCATCCCGGG GTGGCCGAAG CCGCGTGCAT CGCGTGCGCG CATCCGAAAT GGACCGAGCG ACCGCTGCTC GTCGTGGTGC CGCGCGAAGG CGCGAACCTG ACCCGCGACA CGCTGCTCGC GTTCTACGAG GGCAAGGTCG CGAAATGGTG GATTCCGGAC GACGTCGTGT TCGTCGAATC GTTGCCGCAC ACCGCGACCG GCAAGCTGCA GAAGCTGAAG TTGCGCGAGA CGTTCCGCGA TTACGTGTTG CCCACGGCGG TGTGCGCGCC GTAA
|
Protein sequence | MGKPLLGQMM DVPLLVSSLI SHAARHAGDT EIVSKRVEGD LHRYTYRDCE RRAKQLAQAL ARLGVETGDR VGTLAWNGYR HLEAYYGIGG MGAVCHTINP RLFPEQIAYI VNHAEDRYVF FDINFAPLVD AIAPQCPHVK GWIAMTDAAH LPSGATPFLC YETLVEAEDG RYDWPRLDEQ QASGLCYTSG TTGNPKGVLY SHRSTVLHAY GAALPDAMNL SAMDAVLPVV PMFHVNAWGL PYAVPLTGGK LVLPGKDLDG KSLYELMEAE RVTFSAGVPT VWLGLLNYMR EAGVRFSTLN RTVIGGSACP PAMLRTFEDE YGVRVIHAWG MTELSPLGTL AKLNWAQSQR PLDAQRRLLE KQGRVICGVD MRIVGDDGRE LPWDGVAFGE LQVRGPWVID HYFRGDASPL SDGWFPTGDV ATIDPDGFLQ ITDRSKDVIK SGGEWISSID IENVAIAHPG VAEAACIACA HPKWTERPLL VVVPREGANL TRDTLLAFYE GKVAKWWIPD DVVFVESLPH TATGKLQKLK LRETFRDYVL PTAVCAP
|
| |