| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1914 |
|---|
| Symbol | |
|---|
| ID | 6123578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2123289 |
|---|
| End bp | 2124068 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641638483 |
|---|
| Product | TatD family hydrolase |
|---|
| Protein accession | YP_001765197 |
|---|
| Protein GI | 170733250 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.537601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0273018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGTCG ACTCTCACTG CCACATCAAT TTCAAGGGCC TGGCCGACCG CCTGCCGGCC
GTTCTCGAGA ACATGCGCGA GCACGACGTC ACGCATGCGC TGTGCGTGTC GGTCGATCTC
GAGACGCTGC CCGAGGTGCT CGCGATCGCC GAAGCGCACG ACAACGTGTA CGCATCGGTC
GGCGTGCATC CCGATCACGA GGACATGCGC GAGCCGACGC TCGCGGAGCT GGTCGAGCTG
GCCGCGCACC CGAAGGTCGT CGCGATCGGC GAAACCGGCC TCGACTACTA TCGTCTCGAA
GGCCGCTCGA TCGCCGACAT GGAATGGCAG CGCGAACGTT TTCGCACGCA CATTCGCGCG
GCGACCGCGA CGATGAAGCC GCTGATCATC CACACGCGTT CGTCGTCGGA AGACACGCTG
CGGATCATGG CCGAGGAGCG CGCGGACGTG CCGGGCGGCG TGATGCACTG CTTCACCGAG
CCGTGGCCGG TCGCCGAGCA GGCGCTCGCG CAGAACTTCC ATATCTCGCT GTCGGGCATC
GTCACGTTCA AGAACGCGAC CGACGTGCAG GACGTCGCCC GGCGCGTGCC GCTCGACCGG
CTGCTGATCG AGACCGACTC GCCGTACCTC GCGCCGGTGC CGTATCGCGG CAAGCCGAAT
GAACCTGCGT ACGTCAGCCA TGTCGGACGC TTTATCGCAT CCGAGCGCGG TGTCGCCGTC
GAGGCGCTCG CCGATGCGAC GACGCAGAAC TTTTTCCGGC TGTTCAAGAT CGCCCGCTAA
|
|---|
| Protein sequence | MFVDSHCHIN FKGLADRLPA VLENMREHDV THALCVSVDL ETLPEVLAIA EAHDNVYASV
GVHPDHEDMR EPTLAELVEL AAHPKVVAIG ETGLDYYRLE GRSIADMEWQ RERFRTHIRA
ATATMKPLII HTRSSSEDTL RIMAEERADV PGGVMHCFTE PWPVAEQALA QNFHISLSGI
VTFKNATDVQ DVARRVPLDR LLIETDSPYL APVPYRGKPN EPAYVSHVGR FIASERGVAV
EALADATTQN FFRLFKIAR
|
|---|
| |