Gene Bcenmc03_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1904 
Symbol 
ID6123568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2114409 
End bp2114879 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content61% 
IMG OID641638473 
ProductLysM domain/BON superfamily protein 
Protein accessionYP_001765187 
Protein GI170733240 
COG category[S] Function unknown 
COG ID[COG1652] Uncharacterized protein containing LysM domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000169778 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTCTTC TTTCGTTTAT TAAAGAGGCG GGTGAAAAAC TGCTGGGTCA CGCCGATGCG 
CAAGCAGCGG AAGATCCGAA TGCCGCGAAC CAGACTGCGG CCGACGCAAT CAAGAATTAC
ATCAACTCGC AAGGTCTCGA CACGTCGAAC CTGACCGTCG CGTTCGACGG TGCATCGCGC
ACCGTCACGC TGTCGGGCAG CGTCGCCGAT CTCGACACGA AGGCGAAGGT CAAGGTCGCG
GCCGGCAACG TGCAGGGTGT CGCGGGCGTC AACGACGACG ATCTGCAGCC GGACGATCCG
GAAGTGCAGT ACCACGACGT GAAGCCGGGC GACACGCTGT CGGCGATCGC CAAGGAAGTG
TACGGCGATG CGAACAAGTA TCCGGTGATC TTCGAAGCGA ACAAGCCGAT GCTGACGAGC
CCGGACCGGA TCTACCCGGG CCAGAAGCTC GTGATTCCGC CGCAGTCCTG A
 
Protein sequence
MGLLSFIKEA GEKLLGHADA QAAEDPNAAN QTAADAIKNY INSQGLDTSN LTVAFDGASR 
TVTLSGSVAD LDTKAKVKVA AGNVQGVAGV NDDDLQPDDP EVQYHDVKPG DTLSAIAKEV
YGDANKYPVI FEANKPMLTS PDRIYPGQKL VIPPQS