Gene Bcenmc03_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1890 
Symbol 
ID6123554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2100310 
End bp2101401 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content70% 
IMG OID641638459 
ProductNLP/P60 protein 
Protein accessionYP_001765173 
Protein GI170733226 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00780805 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000811276 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTCGAA TCTGGGTTCC CGTCGCCGTC GTCTCCCTGC TTGCGGCCTG CTCCAGCGTG 
CCGCCGCAGT CGGCATCGCG TTCCGCGTCG GGCATGAAGA TCACGACGCC GCGCGCATTC
CCCGCGCCCG CCAATTTCCC GAAATTCGTC GACCACAGCG TCGGCCAGGA AGAAATCTCG
ATCCAGGCGA TGAGCCTCGT CGGCGTCCCG TATCGCTGGG GCGGCAACAC GCCGACGAGC
GGCTTCGACT GCAGCGGGCT CGTGCGCTAC GTGATCGGCC GCGCGGCCGA TGTCAACCTG
CCGCGCACGA CTGCCGACAT GAGCGGCCGC GGCGTATCGG TCGAACCCGA CGAGATCGCG
CCGGGCGACT TGATTTTCTT CAATACGACC GGACGGCCGC ATTCGCACGT CGGCATCTAC
GTCGGCAAGC TGCGCTTCGT CAACGCGCCG TCGACGGGCG GCACCGTACG GCTCGACTAC
CTGACGAACC CGTACTGGGC CAAGCGATTC GACGGCATTC GCCGCGTCGC GCCGCCGCGC
TCGGCCCCGA CGCCGTTCGA TGCGCCGACT TACGAGGCCA AGCGCGACGA GCCGCGCAAT
CCGCCGGCGG TCGCGGCCGC TCCGGTGGTC GTGACGGCTG CCGTCGCACA GCGGCAGCCC
GCGTATGCGT CGTCGCAAGC AAGAGCAACG CAGGCACAGG CACCGGCCAT CCCGAGCACG
CCGGTCGTGA CGGCCGCCGC AGCTGCACCG GCAGCACCGG CCGCCGATCC GTATGAACCG
CCGCCATCGC GGATGCAGGC GGCCCAGCAG CAAGCCACGT CGGTGAATGA CGGCGCAACC
GCGATGACAG CCAATGCAGC CCCGGCCGCC CCGGCGGAGG TCGGCACGCA GATTCCGACG
ACCGCACTGA CGGCCGCCCA GGCTGCCGCC TTCGATGCAG AGCCGCCGCC CGCCACCGCG
TCGGCGCCGG CACGCAGTAT CGAACCCGCG CCCGTGCAGA TATTGCGTGC GTCGACGCAA
TCCGCACCCG TCAGCCCGCG CACGAGTACG GCGGACGATC CGATTGCACG GTTTGCGAAC
GGCAGTTACT GA
 
Protein sequence
MLRIWVPVAV VSLLAACSSV PPQSASRSAS GMKITTPRAF PAPANFPKFV DHSVGQEEIS 
IQAMSLVGVP YRWGGNTPTS GFDCSGLVRY VIGRAADVNL PRTTADMSGR GVSVEPDEIA
PGDLIFFNTT GRPHSHVGIY VGKLRFVNAP STGGTVRLDY LTNPYWAKRF DGIRRVAPPR
SAPTPFDAPT YEAKRDEPRN PPAVAAAPVV VTAAVAQRQP AYASSQARAT QAQAPAIPST
PVVTAAAAAP AAPAADPYEP PPSRMQAAQQ QATSVNDGAT AMTANAAPAA PAEVGTQIPT
TALTAAQAAA FDAEPPPATA SAPARSIEPA PVQILRASTQ SAPVSPRTST ADDPIARFAN
GSY