Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1859 |
Symbol | |
ID | 6123523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2066396 |
End bp | 2067748 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641638428 |
Product | MATE efflux family protein |
Protein accession | YP_001765142 |
Protein GI | 170733195 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0763838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0423968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGGCG ACATCCGCCG GATCGTCGGT CTCGCGTGGC CGGTGCTGGT CGGCCAGCTC GCGATCATCG CGTTCGGCGT GATCGACACC GCGATGGTCG GCCGCTACTC GGCCGTCGAT CTCGCCGCGC TCGGGCTCGG CTCGTCGATC TACGTATCGA TCTACATCGG CCTGACGGGT ATCCTGTCCG CGCTGCAGCC GATCACCGGG CAACTGTACG GCGCGCGGCG CTATGCCGAG ATCGGCGAGG AAGTGCGGCA GGCGCTGTGG CTTGCGCTGC TGCTCGCGAT TCCCGGCTTC CTGCTGCTGC ATTTTCCCGA GCCGCTGCTG CGCGTCGCGC ATGCGCCCGC CGCGCTGCAC GATCGCACCG TCGACTACCT GCGCATCCTG TCGTACGGGC TGCCCGCCAG CCTCGTATTC CGGATCTACA ACGCGCTGAC CAACGCGGCC GGCAAGCCGC GGCTCGCGAT GATCCTCCAG ATCGGCGCGC TACTGCTCAA GTTTCCGCTG AACGTGTGGT TCATCTTCGG CGGCTTCGGC GTACCGGCGC TCGGCGGCCC CGGCTGCGGG CTGGCCAGCA CGCTGATCAA CTGGGCGCTC GCGCTGATCG GCTACACGCT GCTCGCGAAG CTCGACGTGT TCGCGCCGCT CGCGATCTTC TCGCGCTTCT GCTGGCCCGT CTGGGCGCGC CAGAAGGCGA TCCTGAAGCT CGGCGTGCCG ATGGGCCTGT CGTACCTGAT CGAGGTCACG TCGTACACGT GCATGGCGCT GTTCATCGCG CAGTTCGGCA CGACGACGCT CGCCGGCCAC CAGATCGCCG GCAACATCGG CGCGGTGCTG TACATGACGC CGCTGTCGAT CGGCGTGGCG GCGTCGACGC TGGTCGCGCG CGCGCTCGGC GCGGGACGCG CCGAGGAAGC CCGGCTGCTC GGCCGGCACA GCGTGATCTT CGCGTGCGGC GTGGCGGCCG CCTATGGCGT GCTCGTGTTC GCGCTGCGCC CGCTGATCAT CGGCGGCTAT ACGCCGAACC CGGCCGTCGC CGCGGCCGCG ATGCCGCTCG TCGCGATCGT CGCGTGCTAC CACGTGTTCG ATGCGCTGCA GGTCACGTCG GCGTTCGTGC TGCGCGCGTA CAAGGTGGCG GTCGTGCCGA CCGTGATCTA TGCGGTCGCG CTGTGGGGTG TTGGGCTCAG CGGCGGCTAC GTGCTCGGCT TCGACGTGGG CGGGATCGCG CCCGCGTGGC TGATCGGCGC ACGCGGCTTC TGGTTCGCGA ACACGGTCAG CCTGATGCTC GCGGGCGCGG GGCTCGTGCT GTACCTGCGC CGCATCAGTC GCGCGCACGC CGCCTTGGCC TGA
|
Protein sequence | MFGDIRRIVG LAWPVLVGQL AIIAFGVIDT AMVGRYSAVD LAALGLGSSI YVSIYIGLTG ILSALQPITG QLYGARRYAE IGEEVRQALW LALLLAIPGF LLLHFPEPLL RVAHAPAALH DRTVDYLRIL SYGLPASLVF RIYNALTNAA GKPRLAMILQ IGALLLKFPL NVWFIFGGFG VPALGGPGCG LASTLINWAL ALIGYTLLAK LDVFAPLAIF SRFCWPVWAR QKAILKLGVP MGLSYLIEVT SYTCMALFIA QFGTTTLAGH QIAGNIGAVL YMTPLSIGVA ASTLVARALG AGRAEEARLL GRHSVIFACG VAAAYGVLVF ALRPLIIGGY TPNPAVAAAA MPLVAIVACY HVFDALQVTS AFVLRAYKVA VVPTVIYAVA LWGVGLSGGY VLGFDVGGIA PAWLIGARGF WFANTVSLML AGAGLVLYLR RISRAHAALA
|
| |